Os06g0701200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UTP--glucose-1-phosphate uridylyltransferase family protein.
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Os06g0701200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UTP--glucose-1-phosphate uridylyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.59 | 0.238 | 10.3 | -1.37 | 0.102 | -0.171 | 0.438 | 1.42 | -0.207 | 1.09 | 65.62 | 8502 | -- | -- |
| 27.26 | 0.243 | 10.3 | -1.06 | 0.111 | -0.375 | 0.367 | -- | -0.102 | 1.13 | 101.9 | 47520 | -- | -- |
| 25.87 | 0.237 | 10.3 | -1.35 | 0.13 | -0.181 | -- | 1.55 | -0.202 | 0.282 | 100.9 | 7711 | -- | -- |
| 27.76 | 0.245 | 10.3 | -1.07 | 0.117 | -0.375 | -- | -- | -0.107 | 23.6 | 85.7 | 47520 | -- | -- |
| 26.89 | 0.242 | 10.3 | -1.36 | -- | -0.172 | -- | 1.57 | -0.198 | -- | 194.3 | 7759 | -- | -- |
| 30.12 | 0.257 | 10.3 | -1.21 | 0.111 | -- | 0.358 | -- | -0.12 | 0.779 | -- | -- | -- | -- |
| 30.59 | 0.259 | 10.3 | -1.22 | 0.115 | -- | -- | -- | -0.121 | 23.5 | -- | -- | -- | -- |
| 28.63 | 0.249 | 10.3 | -1.07 | -- | -0.372 | -- | -- | -0.106 | -- | 94.69 | 47520 | -- | -- |
| 52.79 | 0.338 | 10.3 | -- | 0.11 | -0.839 | -- | -- | 0.0099 | 23.3 | 111.6 | 47520 | -- | -- |
| 31.42 | 0.262 | 10.3 | -1.22 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 69.91 | 0.391 | 10.3 | -- | 0.104 | -- | -- | -- | 0.0146 | 22.7 | -- | -- | -- | -- |
| 53.55 | 0.341 | 10.3 | -- | -- | -0.836 | -- | -- | 0.0107 | -- | 134.8 | 47520 | -- | -- |
| 70.59 | 0.392 | 10.3 | -- | -- | -- | -- | -- | 0.015 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.79 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 5 | 23.14 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 7 | 23.20 | radiation | 20 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 13 | 23.39 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 21 | 23.53 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 23 | 23.57 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 26 | 23.60 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 29 | 23.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 31 | 23.75 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 32 | 23.76 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 33 | 23.78 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 35 | 23.80 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 37 | 23.81 | radiation | 20 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 42 | 23.87 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 44 | 23.91 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 47 | 23.95 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 48 | 23.95 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 52 | 23.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 53 | 24.00 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 57 | 24.04 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 62 | 24.05 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 63 | 24.06 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 65 | 24.07 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 68 | 24.07 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 69 | 24.07 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 73 | 24.08 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 74 | 24.08 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 75 | 24.08 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 78 | 24.09 | temperature | 15 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 86 | 24.10 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 109 | 24.17 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 121 | 24.18 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 129 | 24.19 | temperature | 15 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 133 | 24.19 | temperature | 15 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 136 | 24.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 137 | 24.20 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 172 | 24.20 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 20 |
| 174 | 24.20 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 198 | 24.21 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 201 | 24.21 | temperature | 15 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 252 | 24.23 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 256 | 24.23 | temperature | 15 | 43200 | < th | dose dependent | sin | 10 | NA |
| 277 | 24.24 | temperature | 15 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 281 | 24.24 | temperature | 15 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 299 | 24.24 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 324 | 24.25 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 10 |
| 345 | 24.26 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 398 | 24.27 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 402 | 24.27 | temperature | 15 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 471 | 24.29 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 499 | 24.30 | temperature | 15 | 43200 | < th | dose independent | sin | 17 | NA |
| 517 | 24.30 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 541 | 24.31 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 588 | 24.32 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 594 | 24.32 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 11 |
| 623 | 24.33 | temperature | 15 | 43200 | > th | dose independent | rect. | 15 | 10 |
| 686 | 24.34 | temperature | 15 | 43200 | < th | dose independent | rect. | 21 | 21 |
| 688 | 24.34 | temperature | 15 | 43200 | < th | dose dependent | no | NA | NA |
| 732 | 24.35 | radiation | 40 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 739 | 24.35 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 19 |
| 743 | 24.36 | temperature | 15 | 43200 | > th | dose independent | sin | 18 | NA |
| 748 | 24.36 | temperature | 15 | 43200 | < th | dose independent | no | NA | NA |
| 763 | 24.36 | temperature | 15 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 767 | 24.36 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 772 | 24.36 | humidity | 90 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 811 | 24.37 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 891 | 24.39 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 938 | 24.40 | temperature | 15 | 43200 | < th | dose dependent | rect. | 5 | 1 |