Os06g0699600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CCT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0699600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : CCT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.76 | 0.547 | 8.19 | 2.76 | 4.01 | -1.35 | 0.0858 | 2.43 | 0.194 | 8.35 | 1.132 | 10 | 21.1 | -- |
| 142.5 | 0.56 | 8.19 | 2.74 | 4 | -1.61 | 0.0882 | -- | 0.183 | 8.43 | 2.513 | 10 | 20.7 | -- |
| 133.93 | 0.543 | 8.2 | 2.73 | 3.99 | -1.56 | -- | 2.79 | 0.183 | 8.37 | 1.132 | 10 | 21.1 | -- |
| 142.27 | 0.556 | 8.2 | 2.77 | 4.02 | -1.33 | -- | -- | 0.186 | 8.38 | 2.668 | 3 | 20.7 | -- |
| 274.72 | 0.776 | 8.31 | 2.72 | -- | -3.44 | -- | 0.104 | 0.154 | -- | 27.67 | 5 | 9.74 | -- |
| 184.99 | 0.638 | 8.19 | 2.79 | 3.91 | -- | -0.0581 | -- | 0.215 | 9.01 | -- | -- | -- | -- |
| 185 | 0.637 | 8.19 | 2.79 | 3.91 | -- | -- | -- | 0.215 | 9.01 | -- | -- | -- | -- |
| 191.11 | 0.647 | 8.31 | 2.77 | -- | -3.86 | -- | -- | 0.192 | -- | 161.3 | 6 | 9.27 | -- |
| 339.97 | 0.859 | 8.24 | -- | 3.88 | -1.48 | -- | -- | -0.079 | 8.44 | 0.4267 | 2 | 19.9 | -- |
| 1064.73 | 1.52 | 8.29 | 2.78 | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
| 389.5 | 0.923 | 8.26 | -- | 3.92 | -- | -- | -- | -0.0952 | 8.95 | -- | -- | -- | -- |
| 389.57 | 0.919 | 8.37 | -- | -- | -3.91 | -- | -- | -0.0944 | -- | 2818 | 2 | 9.07 | -- |
| 1268.64 | 1.66 | 8.36 | -- | -- | -- | -- | -- | -0.069 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.70 | radiation | 40.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 3 | 132.44 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 5 | 133.09 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 6 | 133.21 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 20 | 133.96 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 21 | 134.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 9 |
| 22 | 134.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 25 | 134.28 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 26 | 134.32 | wind | 9.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 27 | 134.32 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 29 | 134.37 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 31 | 134.37 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 32 | 134.37 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 33 | 134.37 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 35 | 134.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 15 |
| 37 | 134.49 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 13 |
| 42 | 134.76 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 9 |
| 43 | 134.76 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 44 | 134.86 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 1 | 13 |
| 51 | 135.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 20 |
| 52 | 135.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 20 |
| 56 | 135.10 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 59 | 135.17 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 60 | 135.17 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 61 | 135.17 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 62 | 135.17 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 15 |
| 64 | 135.19 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 65 | 135.19 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 74 | 135.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 76 | 135.25 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 77 | 135.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 80 | 135.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 81 | 135.25 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 83 | 135.25 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 88 | 135.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 100 | 135.54 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 133 | 135.89 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 4 |
| 134 | 135.89 | radiation | 1.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 135 | 135.89 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 144 | 136.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 145 | 136.27 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 147 | 136.30 | wind | 9.0 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 149 | 136.43 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 150 | 136.44 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 11 |
| 170 | 136.58 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 183 | 136.75 | radiation | 1.0 | 10 | > th | dose independent | sin | 3 | NA |
| 185 | 136.82 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 15 |
| 186 | 136.82 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 15 |
| 189 | 136.87 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 192 | 136.89 | radiation | 1.0 | 10 | < th | dose independent | sin | 3 | NA |
| 204 | 137.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 15 |
| 205 | 137.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 221 | 137.55 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 223 | 137.59 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 236 | 137.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 20 |
| 238 | 137.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 240 | 137.79 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 253 | 138.05 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 260 | 138.09 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 263 | 138.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 269 | 138.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 321 | 138.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 326 | 138.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 327 | 138.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 330 | 138.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 331 | 138.57 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 337 | 138.57 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 342 | 138.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 346 | 138.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 4 |
| 347 | 138.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 348 | 138.70 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 395 | 139.14 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 411 | 139.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 22 |
| 412 | 139.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 469 | 140.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 481 | 140.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 494 | 140.37 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 503 | 140.68 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 15 |
| 512 | 140.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 564 | 141.59 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 565 | 141.63 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 5 |
| 571 | 141.66 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 572 | 141.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 575 | 141.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 579 | 141.66 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 588 | 141.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 589 | 141.66 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 598 | 141.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 693 | 142.05 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 769 | 142.46 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 791 | 142.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 811 | 142.74 | radiation | 20.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 814 | 142.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 892 | 143.37 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 922 | 143.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 927 | 143.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 985 | 143.85 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 7 |