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Os06g0699200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0151) R2 : 0.47
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.761 (0.038) R2dC : 0.465 R2C : 0.466
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.057 (0.0318) R2dN8 : 0.00482 R2N8 : 0.00577
σ : 0.285
deviance : 37.11
__
_____
C
peak time of C : 3.42
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.3 0.25 10.3 0.451 0.598 0.251 -0.52 0.104 0.233 3.5 24.7 51 -- --
28.31 0.248 10.3 0.488 0.617 0.248 -0.452 -- 0.241 3.49 24.4 64 -- --
28.9 0.252 10.3 0.503 0.613 0.23 -- -0.0688 0.226 3.63 24.7 51 -- --
28.93 0.252 10.3 0.483 0.613 0.227 -- -- 0.219 3.63 24.7 51 -- --
40.41 0.296 10.3 0.642 -- 0.528 -- -0.238 0.314 -- 25.9 94 -- --
32.13 0.266 10.4 0.411 0.754 -- -0.353 -- 0.101 3.42 -- -- -- --
32.52 0.267 10.4 0.417 0.753 -- -- -- 0.103 3.42 -- -- -- --
40.58 0.297 10.3 0.586 -- 0.519 -- -- 0.296 -- 25.82 97 -- --
34.9 0.277 10.4 -- 0.654 0.176 -- -- 0.141 3.57 24.65 44 -- --
64.32 0.375 10.4 0.449 -- -- -- -- 0.123 -- -- -- -- --
37.11 0.285 10.4 -- 0.761 -- -- -- 0.057 3.42 -- -- -- --
49.46 0.328 10.3 -- -- 0.474 -- -- 0.217 -- 25.8 97 -- --
69.64 0.39 10.4 -- -- -- -- -- 0.0735 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.96 temperature 15.0 10 > th dose dependent rect. 7 19
8 26.27 temperature 10.0 10 > th dose dependent rect. 6 23
29 26.65 temperature 25.0 30 < th dose independent rect. 12 19
51 26.86 temperature 30.0 90 < th dose dependent rect. 13 17
60 26.92 temperature 30.0 30 < th dose dependent rect. 12 19
97 27.18 temperature 25.0 30 < th dose independent rect. 2 18
122 27.29 radiation 10.0 43200 < th dose dependent rect. 19 8
133 27.35 temperature 25.0 30 < th dose independent rect. 24 20
146 27.39 temperature 30.0 10 < th dose dependent rect. 2 18
172 27.53 temperature 30.0 90 < th dose dependent rect. 13 6
176 27.54 wind 5.0 90 < th dose independent rect. 6 22
180 27.56 radiation 10.0 30 < th dose dependent rect. 5 13
214 27.68 atmosphere 1000.0 10 > th dose independent rect. 12 19
221 27.68 temperature 30.0 90 < th dose dependent rect. 1 22
225 27.69 wind 5.0 90 < th dose independent rect. 6 20
249 27.73 humidity 70.0 90 > th dose independent rect. 13 17
269 27.77 wind 9.0 90 < th dose dependent rect. 6 22
287 27.80 temperature 30.0 90 < th dose dependent rect. 15 4
291 27.80 wind 9.0 90 < th dose dependent rect. 6 20
306 27.83 temperature 30.0 10 < th dose dependent rect. 24 23
311 27.84 atmosphere 995.0 90 > th dose dependent rect. 12 18
343 27.89 humidity 50.0 10 > th dose dependent rect. 12 19
344 27.89 atmosphere 995.0 10 > th dose dependent rect. 12 19
354 27.92 humidity 70.0 90 > th dose independent rect. 15 15
372 27.94 radiation 10.0 90 < th dose dependent sin 3 NA
375 27.94 radiation 10.0 90 < th dose dependent rect. 2 16
386 27.96 atmosphere 1015.0 10 < th dose dependent rect. 7 19
388 27.97 radiation 1.0 30 < th dose independent rect. 5 13
404 27.98 humidity 50.0 90 > th dose dependent rect. 13 17
408 27.98 atmosphere 1015.0 90 < th dose dependent rect. 7 18
418 28.00 wind 7.0 10 < th dose independent rect. 6 23
438 28.04 temperature 30.0 270 < th dose independent rect. 11 7
441 28.04 temperature 30.0 10 < th dose dependent rect. 12 8
450 28.05 wind 9.0 270 < th dose independent rect. 3 23
456 28.06 atmosphere 1000.0 90 > th dose independent rect. 1 6
457 28.06 wind 5.0 270 < th dose independent rect. 18 16
508 28.13 atmosphere 1000.0 10 > th dose independent rect. 2 17
510 28.13 precipitation 0.1 270 < th dose independent rect. 3 23
516 28.13 precipitation 0.1 270 < th dose dependent rect. 3 23
517 28.14 atmosphere 995.0 14400 > th dose independent rect. 17 2
518 28.14 temperature 25.0 90 < th dose independent rect. 3 3
540 28.16 temperature 25.0 30 < th dose independent rect. 2 5
544 28.17 atmosphere 1000.0 270 > th dose independent rect. 1 4
550 28.17 radiation 40.0 90 < th dose dependent rect. 13 17
565 28.19 atmosphere 1000.0 270 > th dose independent rect. 2 1
593 28.21 atmosphere 1000.0 10 > th dose independent rect. 2 5
594 28.21 wind 7.0 270 < th dose independent rect. 15 10
596 28.21 radiation 10.0 30 < th dose dependent rect. 5 2
600 28.22 wind 7.0 10 < th dose independent rect. 7 19
601 28.22 radiation 1.0 270 < th dose independent rect. 22 21
615 28.23 humidity 50.0 90 > th dose dependent rect. 15 15
654 28.27 radiation 10.0 43200 < th dose dependent rect. 22 5
655 28.27 temperature 10.0 270 > th dose dependent rect. 17 8
659 28.27 wind 9.0 10 < th dose dependent rect. 7 19
661 28.28 temperature 25.0 90 < th dose independent rect. 15 4
671 28.29 radiation 1.0 270 < th dose independent rect. 1 17
674 28.29 temperature 10.0 270 > th dose dependent rect. 18 16
681 28.30 temperature 25.0 10 < th dose independent rect. 12 8
701 28.31 atmosphere 995.0 14400 < th dose independent rect. 18 1
711 28.31 atmosphere 995.0 14400 < th dose dependent rect. 18 1
719 28.32 atmosphere 1000.0 30 > th dose independent rect. 5 1
720 28.32 atmosphere 1000.0 1440 > th dose independent rect. 6 1
723 28.32 temperature 25.0 90 < th dose independent rect. 13 6
752 28.34 radiation 1.0 270 < th dose dependent rect. 22 21
769 28.36 temperature 25.0 30 < th dose independent rect. 5 1
801 28.38 temperature 25.0 270 < th dose independent rect. 2 1
806 28.38 temperature 25.0 30 > th dose independent rect. 23 23
822 28.39 temperature 25.0 30 < th dose independent rect. 8 23
823 28.39 temperature 25.0 270 > th dose dependent sin 10 NA
846 28.40 precipitation 0.1 30 < th dose independent rect. 6 23
856 28.40 precipitation 0.1 30 < th dose dependent rect. 6 23
866 28.41 wind 9.0 43200 > th dose dependent rect. 17 3
888 28.43 atmosphere 995.0 14400 > th dose independent rect. 13 6
971 28.46 radiation 10.0 30 < th dose dependent rect. 5 11
985 28.47 precipitation 0.1 90 < th dose independent rect. 7 18
989 28.47 temperature 25.0 10 < th dose dependent sin 22 NA
994 28.47 precipitation 0.1 90 < th dose dependent rect. 7 18