Os06g0686400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os06g0686400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.36 | 0.444 | 10.1 | -0.37 | 0.794 | -0.572 | -0.53 | 0.456 | -0.0872 | 4.09 | 10.01 | 126 | -- | -- |
| 90.09 | 0.442 | 10.1 | -0.38 | 0.799 | -0.575 | -0.738 | -- | -0.0796 | 3.95 | 10.01 | 130 | -- | -- |
| 89.85 | 0.441 | 10.1 | -0.374 | 0.802 | -0.563 | -- | 0.679 | -0.0875 | 4.04 | 10 | 130 | -- | -- |
| 91.83 | 0.446 | 10.1 | -0.351 | 0.75 | -0.583 | -- | -- | -0.0971 | 3.95 | 10.01 | 159 | -- | -- |
| 98.55 | 0.462 | 10.1 | -0.46 | -- | -1.04 | -- | 0.682 | -0.145 | -- | 5.58 | 287 | -- | -- |
| 97.81 | 0.464 | 10.1 | -0.462 | 1.25 | -- | -0.681 | -- | -0.134 | 2.86 | -- | -- | -- | -- |
| 99.39 | 0.467 | 10.1 | -0.446 | 1.24 | -- | -- | -- | -0.13 | 2.84 | -- | -- | -- | -- |
| 99.37 | 0.464 | 10.1 | -0.433 | -- | -1.05 | -- | -- | -0.0946 | -- | 5.25 | 302 | -- | -- |
| 95.19 | 0.454 | 10.1 | -- | 0.744 | -0.596 | -- | -- | -0.0489 | 3.91 | 10.01 | 175 | -- | -- |
| 188.87 | 0.642 | 10.1 | -0.393 | -- | -- | -- | -- | -0.0976 | -- | -- | -- | -- | -- |
| 104.63 | 0.478 | 10.1 | -- | 1.24 | -- | -- | -- | -0.0799 | 2.84 | -- | -- | -- | -- |
| 104.35 | 0.476 | 10.1 | -- | -- | -1.06 | -- | -- | -0.0471 | -- | 5.257 | 300 | -- | -- |
| 192.94 | 0.648 | 10.1 | -- | -- | -- | -- | -- | -0.054 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.19 | humidity | 70.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 3 | 84.52 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 6 | 84.91 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 7 | 84.99 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 10 | 85.27 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 13 | 85.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 14 | 85.34 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 17 | 85.39 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 18 | 85.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 21 | 85.57 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 10 |
| 25 | 85.63 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 13 | 10 |
| 43 | 85.91 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 56 | 86.03 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 59 | 86.04 | humidity | 70.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 65 | 86.09 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 87 | 86.31 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 92 | 86.34 | radiation | 30.0 | 10 | < th | dose independent | rect. | 13 | 10 |
| 107 | 86.45 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 118 | 86.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 120 | 86.59 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 161 | 86.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 19 |
| 165 | 86.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 13 |
| 201 | 86.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 217 | 86.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 218 | 86.99 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 226 | 87.05 | humidity | 70.0 | 10 | > th | dose independent | rect. | 2 | 21 |
| 228 | 87.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 234 | 87.08 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 16 |
| 254 | 87.22 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 261 | 87.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 263 | 87.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 264 | 87.25 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 265 | 87.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 268 | 87.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 269 | 87.25 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 274 | 87.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 276 | 87.25 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 277 | 87.25 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 284 | 87.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 285 | 87.26 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 298 | 87.30 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 300 | 87.32 | humidity | 70.0 | 30 | > th | dose independent | rect. | 13 | 19 |
| 307 | 87.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 312 | 87.35 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 21 |
| 316 | 87.35 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 21 |
| 325 | 87.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 5 |
| 326 | 87.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 328 | 87.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 329 | 87.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 356 | 87.45 | wind | 1.0 | 90 | > th | dose independent | rect. | 22 | 19 |
| 366 | 87.47 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 367 | 87.47 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 368 | 87.47 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 15 | 8 |
| 408 | 87.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 434 | 87.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 19 |
| 435 | 87.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 470 | 87.75 | temperature | 30.0 | 90 | < th | dose independent | rect. | 15 | 7 |
| 474 | 87.76 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 507 | 87.81 | wind | 1.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 521 | 87.84 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 556 | 87.92 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 572 | 87.96 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 586 | 88.00 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 601 | 88.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 4 |
| 607 | 88.04 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 608 | 88.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 615 | 88.05 | temperature | 30.0 | 10 | < th | dose independent | rect. | 15 | 8 |
| 623 | 88.07 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 634 | 88.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 635 | 88.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 636 | 88.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 637 | 88.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 640 | 88.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 641 | 88.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 649 | 88.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 650 | 88.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 657 | 88.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 1 |
| 663 | 88.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 668 | 88.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 669 | 88.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 670 | 88.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 673 | 88.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 674 | 88.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 683 | 88.11 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 685 | 88.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 687 | 88.11 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 693 | 88.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 697 | 88.12 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 716 | 88.15 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 718 | 88.15 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 731 | 88.18 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 736 | 88.19 | radiation | 10.0 | 30 | < th | dose independent | rect. | 10 | 13 |
| 737 | 88.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 755 | 88.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 764 | 88.24 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 770 | 88.25 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 790 | 88.30 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 837 | 88.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 6 |
| 842 | 88.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 849 | 88.38 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 861 | 88.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 20 |
| 862 | 88.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 887 | 88.43 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 889 | 88.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 890 | 88.44 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 891 | 88.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 894 | 88.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 895 | 88.44 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 900 | 88.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 901 | 88.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 903 | 88.44 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 910 | 88.44 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 917 | 88.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 951 | 88.48 | radiation | 10.0 | 90 | < th | dose dependent | sin | 22 | NA |
| 966 | 88.49 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 19 |