Os06g0685300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
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Os06g0685300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 575.04 | 1.12 | 10.4 | -6.53 | 1.02 | 0.152 | 0.059 | -9.9 | -1.75 | 0.453 | 1000 | 10 | -- | -- |
| 571.95 | 1.12 | 10.5 | -7.16 | 1.05 | -1.52 | -0.101 | -- | -1.73 | 0.55 | 1001 | 195 | -- | -- |
| 575.05 | 1.13 | 10.4 | -6.54 | 1.02 | 0.142 | -- | -9.84 | -1.75 | 0.453 | 1000 | 17 | -- | -- |
| 571.74 | 1.11 | 10.5 | -7.15 | 1.05 | -1.52 | -- | -- | -1.72 | 0.586 | 1002 | 4 | -- | -- |
| 639.98 | 1.18 | 10.5 | -6.84 | -- | -0.704 | -- | -4.74 | -1.73 | -- | 1000 | 17 | -- | -- |
| 646.14 | 1.19 | 10.6 | -6.91 | 0.972 | -- | -0.0778 | -- | -1.85 | 0.397 | -- | -- | -- | -- |
| 646.17 | 1.19 | 10.6 | -6.91 | 0.972 | -- | -- | -- | -1.85 | 0.396 | -- | -- | -- | -- |
| 639.49 | 1.18 | 10.5 | -7.08 | -- | -1.42 | -- | -- | -1.72 | -- | 1002 | 2 | -- | -- |
| 1884.98 | 2.03 | 10.4 | -- | 0.896 | -0.683 | -- | -- | -0.991 | 0.144 | 1002 | 7 | -- | -- |
| 705.55 | 1.24 | 10.5 | -6.88 | -- | -- | -- | -- | -1.84 | -- | -- | -- | -- | -- |
| 1904.64 | 2.04 | 10.4 | -- | 0.877 | -- | -- | -- | -1.08 | 24 | -- | -- | -- | -- |
| 1935.51 | 2.05 | 10.3 | -- | -- | -0.647 | -- | -- | -0.987 | -- | 1002 | 5 | -- | -- |
| 1953.09 | 2.06 | 10.4 | -- | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 512.83 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 2 | 514.34 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 4 | 514.78 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 6 | 517.96 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 9 | 518.57 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 15 | 519.97 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 16 | 520.16 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 33 | 521.00 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 36 | 521.27 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 49 | 522.76 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 52 | 523.05 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 57 | 523.81 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 83 | 525.29 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 87 | 525.99 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 96 | 526.91 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 22 |
| 97 | 526.94 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 105 | 527.43 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 112 | 527.76 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 145 | 528.02 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 151 | 528.14 | wind | 9 | 14400 | > th | dose dependent | no | NA | NA |
| 157 | 528.29 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 218 | 530.14 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 237 | 530.89 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 243 | 531.06 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 245 | 531.13 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 259 | 531.72 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 278 | 531.93 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 281 | 532.06 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 330 | 532.75 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 333 | 532.83 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 337 | 532.89 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 370 | 533.14 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 380 | 533.47 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 389 | 533.66 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 392 | 533.80 | wind | 9 | 14400 | > th | dose independent | no | NA | NA |
| 398 | 533.91 | temperature | 30 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 409 | 534.16 | wind | 9 | 14400 | > th | dose dependent | sin | 18 | NA |
| 412 | 534.30 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 418 | 534.41 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 428 | 534.55 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 436 | 534.78 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 437 | 534.78 | temperature | 30 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 440 | 534.87 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 469 | 535.37 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 521 | 535.68 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 550 | 536.09 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 4 |
| 557 | 536.17 | radiation | 20 | 43200 | > th | dose independent | sin | 14 | NA |
| 589 | 536.55 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 605 | 536.80 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 628 | 537.08 | wind | 9 | 14400 | < th | dose independent | no | NA | NA |
| 636 | 537.45 | radiation | 30 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 639 | 537.48 | wind | 9 | 14400 | > th | dose dependent | sin | 8 | NA |
| 643 | 537.52 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 656 | 537.79 | wind | 9 | 14400 | > th | dose independent | sin | 17 | NA |
| 689 | 538.07 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 705 | 538.25 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 709 | 538.28 | radiation | 30 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 711 | 538.29 | radiation | 30 | 43200 | < th | dose dependent | rect. | 14 | 6 |
| 754 | 538.55 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 756 | 538.58 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 762 | 538.64 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 783 | 539.05 | radiation | 30 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 801 | 539.33 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 907 | 540.38 | radiation | 30 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 916 | 540.46 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 917 | 540.47 | radiation | 30 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 927 | 540.51 | radiation | 30 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 937 | 540.66 | wind | 9 | 14400 | > th | dose independent | sin | 8 | NA |