Os06g0675300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0675300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.89 | 0.384 | 3.05 | -0.401 | 0.107 | 0.869 | -0.0994 | -7.49 | 0.0145 | 3.33 | 31.26 | 8 | -- | -- |
| 71.79 | 0.398 | 3 | -0.00498 | 0.117 | 0.155 | -0.011 | -- | 0.0125 | 3.89 | 31.26 | 8 | -- | -- |
| 66.87 | 0.384 | 3.04 | -0.388 | 0.107 | 0.87 | -- | -7.53 | 0.0153 | 3.38 | 31.26 | 7 | -- | -- |
| 71.79 | 0.397 | 3 | -0.00487 | 0.117 | 0.156 | -- | -- | 0.0126 | 3.9 | 31.26 | 7 | -- | -- |
| 67.46 | 0.385 | 3.04 | -0.383 | -- | 0.83 | -- | -7.6 | 0.0153 | -- | 31.26 | 7 | -- | -- |
| 72.3 | 0.399 | 3.01 | 0.00587 | 0.0895 | -- | -0.0627 | -- | 0.00326 | 3.91 | -- | -- | -- | -- |
| 72.31 | 0.398 | 3.01 | 0.00673 | 0.0894 | -- | -- | -- | 0.00361 | 4 | -- | -- | -- | -- |
| 72.48 | 0.398 | 3.01 | 0.00327 | -- | 0.106 | -- | -- | 0.0126 | -- | 31.26 | 7 | -- | -- |
| 71.79 | 0.397 | 3 | -- | 0.117 | 0.155 | -- | -- | 0.0131 | 3.9 | 31.26 | 7 | -- | -- |
| 72.75 | 0.399 | 3.01 | 0.0104 | -- | -- | -- | -- | 0.00599 | -- | -- | -- | -- | -- |
| 72.31 | 0.398 | 3.01 | -- | 0.0895 | -- | -- | -- | 0.00286 | 4 | -- | -- | -- | -- |
| 72.49 | 0.398 | 3.01 | -- | -- | 0.106 | -- | -- | 0.0123 | -- | 31.25 | 7 | -- | -- |
| 72.75 | 0.398 | 3.01 | -- | -- | -- | -- | -- | 0.00484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.06 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 2 | 66.61 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 66.76 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 8 | 66.83 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 46 | 67.07 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 110 | 67.39 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 1 |
| 111 | 67.39 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 113 | 67.42 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 157 | 67.99 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 22 |
| 166 | 68.05 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 286 | 68.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 7 |
| 365 | 68.79 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 3 |
| 367 | 68.81 | temperature | 30 | 30 | < th | dose independent | sin | 8 | NA |
| 452 | 69.09 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 464 | 69.12 | wind | 1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 468 | 69.15 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 470 | 69.16 | temperature | 30 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 497 | 69.22 | humidity | 90 | 30 | > th | dose independent | rect. | 24 | 3 |
| 549 | 69.34 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 552 | 69.35 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 625 | 69.44 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 777 | 69.49 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 802 | 69.51 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 836 | 69.59 | humidity | 80 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 843 | 69.63 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 1 |
| 845 | 69.63 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 24 | 2 |
| 867 | 69.68 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 11 | 16 |
| 872 | 69.70 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 957 | 69.81 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 21 | 23 |
| 970 | 69.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 976 | 69.85 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |