Os06g0674000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0674000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411.84 | 0.953 | 4.13 | 4.03 | 0.14 | -2.64 | -0.0201 | -3.97 | 1.08 | 11.8 | 1.31 | 7197 | 5.79 | -- |
| 435.21 | 0.972 | 4.15 | 4.73 | 0.153 | -2.59 | 0.29 | -- | 1.25 | 12 | 1.385 | 8646 | 5.92 | -- |
| 411.83 | 0.945 | 4.13 | 4.02 | 0.14 | -2.64 | -- | -3.98 | 1.08 | 11.9 | 1.305 | 7197 | 5.86 | -- |
| 429.07 | 0.965 | 4.15 | 5.05 | 0.143 | -2.61 | -- | -- | 1.25 | 12 | 1.389 | 10087 | 5.91 | -- |
| 407.44 | 0.94 | 4.14 | 3.96 | -- | -2.64 | -- | -4 | 1.08 | -- | 1.31 | 10074 | 5.82 | -- |
| 614.5 | 1.16 | 4.26 | 4.94 | 0.277 | -- | 0.556 | -- | 0.549 | 13.9 | -- | -- | -- | -- |
| 615.52 | 1.16 | 4.26 | 4.96 | 0.279 | -- | -- | -- | 0.552 | 13.1 | -- | -- | -- | -- |
| 416.98 | 0.951 | 4.14 | 5.28 | -- | -2.75 | -- | -- | 1.31 | -- | 1.5 | 14061 | 6.18 | -- |
| 871.87 | 1.38 | 4.03 | -- | 0.00914 | -2.94 | -- | -- | 0.649 | 1.47 | 4.17 | 9836 | 7.67 | -- |
| 620.34 | 1.16 | 4.27 | 4.95 | -- | -- | -- | -- | 0.546 | -- | -- | -- | -- | -- |
| 1263.06 | 1.66 | 4.39 | -- | 0.202 | -- | -- | -- | -0.000428 | 12.1 | -- | -- | -- | -- |
| 839.76 | 1.35 | 4.2 | -- | -- | -3.19 | -- | -- | 0.869 | -- | 4.17 | 9851 | 7.55 | -- |
| 1265.64 | 1.66 | 4.39 | -- | -- | -- | -- | -- | -0.00267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 397.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 2 | 397.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 3 | 397.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 7 | 399.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 8 | 400.60 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 11 | 401.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 20 | 403.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 22 | 403.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 23 | 403.78 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 30 | 405.01 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 36 | 405.68 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 39 | 405.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 40 | 405.86 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 44 | 405.99 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 61 | 406.56 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 14 | 14 |
| 86 | 407.06 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 96 | 407.23 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 12 | 19 |
| 98 | 407.26 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 106 | 407.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 128 | 407.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 130 | 407.49 | temperature | 25.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 137 | 407.55 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 11 |
| 148 | 407.58 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 162 | 407.63 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 196 | 407.71 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 23 | 22 |
| 197 | 407.72 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 198 | 407.72 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 212 | 407.73 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 226 | 407.75 | temperature | 10.0 | 14400 | > th | dose dependent | no | NA | NA |
| 227 | 407.75 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 234 | 407.76 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 236 | 407.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 248 | 407.79 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 313 | 407.90 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 357 | 407.96 | temperature | 25.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 399 | 408.00 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 502 | 408.14 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 589 | 408.28 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 639 | 408.35 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 646 | 408.36 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 657 | 408.38 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 730 | 408.50 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 731 | 408.50 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 823 | 408.71 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 900 | 408.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 931 | 408.90 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 1000 | 409.02 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |