Os06g0669800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os06g0669800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.29 | 0.236 | 10 | 0.494 | 0.898 | 0.502 | 0.396 | 0.852 | 0.379 | 22.1 | 70.18 | 2701 | -- | -- |
| 26.27 | 0.239 | 9.99 | 0.606 | 0.889 | 0.584 | 0.34 | -- | 0.411 | 22.1 | 70 | 2683 | -- | -- |
| 25.87 | 0.237 | 10 | 0.479 | 0.885 | 0.489 | -- | 0.833 | 0.379 | 22 | 70 | 2743 | -- | -- |
| 26.74 | 0.241 | 10 | 0.584 | 0.907 | 0.572 | -- | -- | 0.408 | 22.1 | 70.05 | 2676 | -- | -- |
| 70.48 | 0.393 | 9.99 | 0.516 | -- | 0.337 | -- | -0.0895 | 0.332 | -- | 67 | 4421 | -- | -- |
| 35.99 | 0.281 | 10 | 0.529 | 0.845 | -- | 0.254 | -- | 0.343 | 21.8 | -- | -- | -- | -- |
| 36.24 | 0.282 | 10 | 0.519 | 0.845 | -- | -- | -- | 0.343 | 21.8 | -- | -- | -- | -- |
| 70.52 | 0.393 | 9.99 | 0.514 | -- | 0.337 | -- | -- | 0.332 | -- | 67 | 4421 | -- | -- |
| 30.49 | 0.257 | 10 | -- | 0.876 | 0.76 | -- | -- | 0.365 | 22.2 | 65 | 17055 | -- | -- |
| 78.72 | 0.415 | 9.99 | 0.527 | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
| 43.34 | 0.308 | 10 | -- | 0.846 | -- | -- | -- | 0.285 | 21.8 | -- | -- | -- | -- |
| 72.66 | 0.397 | 10 | -- | -- | 0.803 | -- | -- | 0.301 | -- | 63.74 | 28883 | -- | -- |
| 86.06 | 0.433 | 10 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.05 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 25.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 4 | 25.16 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 5 | 25.17 | wind | 7 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 9 | 25.23 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 14 | 25.30 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 17 | 25.34 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 20 | 25.40 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 35 | 25.47 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 36 | 25.49 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 41 | 25.52 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 44 | 25.52 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 15 |
| 56 | 25.55 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 74 | 25.60 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 79 | 25.61 | humidity | 70 | 14400 | < th | dose dependent | sin | 13 | NA |
| 109 | 25.63 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 120 | 25.66 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 136 | 25.68 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 181 | 25.73 | humidity | 70 | 14400 | < th | dose independent | sin | 11 | NA |
| 190 | 25.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 200 | 25.79 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 213 | 25.81 | humidity | 60 | 14400 | > th | dose independent | sin | 15 | NA |
| 217 | 25.81 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 225 | 25.84 | humidity | 60 | 14400 | < th | dose independent | sin | 14 | NA |
| 326 | 25.94 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 329 | 25.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 332 | 25.95 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 346 | 25.95 | humidity | 80 | 14400 | < th | dose dependent | rect. | 10 | 10 |
| 365 | 25.97 | humidity | 70 | 14400 | > th | dose independent | sin | 11 | NA |
| 374 | 25.98 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 485 | 26.08 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 497 | 26.09 | humidity | 50 | 14400 | > th | dose dependent | rect. | 10 | 10 |
| 542 | 26.13 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 546 | 26.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 550 | 26.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 637 | 26.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 663 | 26.20 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 719 | 26.23 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 740 | 26.24 | humidity | 60 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 781 | 26.27 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 801 | 26.28 | wind | 7 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 876 | 26.31 | humidity | 50 | 14400 | > th | dose dependent | sin | 21 | NA |
| 919 | 26.33 | humidity | 70 | 14400 | < th | dose independent | no | NA | NA |
| 923 | 26.33 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 13 |