Os06g0663100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0663100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.86 | 0.438 | 7.39 | -1.75 | 0.602 | -0.936 | -0.744 | 1.08 | -0.559 | 18.8 | 24.01 | 826 | -- | -- |
| 88.42 | 0.438 | 7.37 | -1.55 | 0.57 | -1.08 | -0.911 | -- | -0.535 | 19 | 23.65 | 834 | -- | -- |
| 88.14 | 0.437 | 7.39 | -1.78 | 0.595 | -0.913 | -- | 1.33 | -0.57 | 18.7 | 24.06 | 792 | -- | -- |
| 90.36 | 0.443 | 7.37 | -1.57 | 0.597 | -1.1 | -- | -- | -0.527 | 18.6 | 23.68 | 836 | -- | -- |
| 95.24 | 0.455 | 7.41 | -2.05 | -- | -1.45 | -- | 2.6 | -0.661 | -- | 53.12 | 560 | -- | -- |
| 104.15 | 0.478 | 7.32 | -1.3 | 0.658 | -- | -1.01 | -- | -0.327 | 19.5 | -- | -- | -- | -- |
| 106.88 | 0.484 | 7.32 | -1.27 | 0.661 | -- | -- | -- | -0.328 | 19.3 | -- | -- | -- | -- |
| 100.21 | 0.466 | 7.35 | -1.6 | -- | -1.39 | -- | -- | -0.541 | -- | 39.57 | 546 | -- | -- |
| 148.05 | 0.567 | 7.3 | -- | 0.586 | -0.333 | -- | -- | -0.234 | 19.5 | 32.96 | 350 | -- | -- |
| 130.04 | 0.533 | 7.31 | -1.28 | -- | -- | -- | -- | -0.339 | -- | -- | -- | -- | -- |
| 149.53 | 0.572 | 7.29 | -- | 0.673 | -- | -- | -- | -0.186 | 19.2 | -- | -- | -- | -- |
| 162.02 | 0.593 | 7.3 | -- | -- | -0.834 | -- | -- | -0.295 | -- | 45.77 | 485 | -- | -- |
| 173.5 | 0.615 | 7.28 | -- | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 2 | 76.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 16 | 77.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 7 |
| 31 | 77.47 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 32 | 77.50 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 33 | 77.52 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 47 | 77.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 77 | 78.32 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 182 | 79.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 426 | 81.05 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 467 | 81.34 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 486 | 81.45 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 14 |
| 522 | 81.71 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 14 |
| 550 | 81.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 630 | 82.37 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 673 | 82.60 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 691 | 82.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 733 | 82.99 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 785 | 83.25 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 919 | 84.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 933 | 84.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 943 | 84.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 947 | 84.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |