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Os06g0659500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutaredoxin.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0184) R2 : 0.426
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.79 (0.0479) R2dC : 0.345 R2C : 0.31
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.327 (0.0387) R2dN8 : 0.116 R2N8 : 0.0807
σ : 0.347
deviance : 55.09
__
_____
C
peak time of C : 19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.57 0.288 11.5 0.754 0.801 0.739 -0.159 0.556 0.486 19.1 0.7005 1425 -- --
37.97 0.287 11.5 0.78 0.808 0.759 -0.163 -- 0.489 19.2 0.8196 1416 -- --
37.63 0.286 11.5 0.756 0.802 0.737 -- 0.556 0.486 19.1 0.71 1422 -- --
37.91 0.287 11.5 0.749 0.806 0.666 -- -- 0.484 19.3 0.818 1402 -- --
69.53 0.388 11.5 0.704 -- 0.947 -- 1.12 0.478 -- 0.7 1474 -- --
43.08 0.308 11.5 0.668 0.798 -- -0.21 -- 0.402 19 -- -- -- --
43.19 0.308 11.5 0.672 0.797 -- -- -- 0.402 19 -- -- -- --
70.18 0.39 11.5 0.753 -- 0.669 -- -- 0.483 -- 1.832 1477 -- --
53.11 0.339 11.5 -- 0.898 0.406 -- -- 0.388 19.1 8.435 2280 -- --
76.62 0.409 11.5 0.656 -- -- -- -- 0.387 -- -- -- -- --
55.09 0.347 11.5 -- 0.79 -- -- -- 0.327 19 -- -- -- --
84.15 0.429 11.5 -- -- 0.187 -- -- 0.308 -- 5.96 1499 -- --
87.96 0.438 11.5 -- -- -- -- -- 0.314 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.58 temperature 20.0 270 > th dose dependent rect. 1 10
3 36.79 temperature 20.0 90 > th dose dependent rect. 3 10
6 36.91 radiation 1.0 1440 < th dose dependent rect. 7 11
12 37.04 precipitation 0.1 4320 > th dose independent rect. 13 5
13 37.04 temperature 20.0 90 > th dose dependent sin 5 NA
14 37.05 precipitation 0.1 4320 < th dose independent rect. 13 5
15 37.05 precipitation 0.1 4320 < th dose dependent rect. 13 5
18 37.07 precipitation 0.1 4320 < th dose independent rect. 10 8
19 37.07 precipitation 0.1 4320 < th dose dependent rect. 10 8
26 37.12 temperature 20.0 10 > th dose dependent sin 4 NA
29 37.13 precipitation 0.1 4320 > th dose independent rect. 10 8
33 37.14 precipitation 0.1 4320 > th dose dependent rect. 13 5
34 37.14 precipitation 0.1 4320 > th dose dependent rect. 4 14
36 37.17 precipitation 0.1 4320 < th dose independent rect. 6 12
37 37.17 precipitation 0.1 4320 < th dose dependent rect. 6 12
41 37.21 precipitation 0.1 4320 > th dose independent rect. 6 12
44 37.21 temperature 20.0 10 > th dose dependent rect. 3 9
55 37.28 precipitation 0.1 4320 > th dose dependent rect. 10 9
69 37.36 wind 7.0 43200 > th dose independent rect. 17 1
70 37.36 precipitation 0.1 720 > th dose independent rect. 2 2
71 37.36 radiation 1.0 1440 < th dose independent rect. 6 12
79 37.39 temperature 25.0 90 > th dose dependent sin 8 NA
83 37.40 precipitation 0.1 720 > th dose dependent rect. 2 2
85 37.42 radiation 1.0 1440 < th dose independent rect. 11 1
88 37.42 radiation 1.0 1440 < th dose dependent rect. 11 1
95 37.44 wind 7.0 43200 < th dose independent rect. 17 1
111 37.49 precipitation 0.1 14400 > th dose dependent rect. 17 2
114 37.51 radiation 1.0 1440 > th dose independent rect. 7 11
118 37.52 radiation 1.0 1440 < th dose independent sin 0 NA
130 37.57 precipitation 0.1 14400 > th dose dependent rect. 17 6
152 37.61 radiation 1.0 1440 < th dose dependent sin 23 NA
173 37.63 radiation 1.0 1440 < th dose independent rect. 6 23
180 37.64 radiation 1.0 1440 < th dose independent rect. 6 21
183 37.64 temperature 30.0 90 < th dose dependent sin 4 NA
186 37.65 radiation 1.0 1440 > th dose independent sin 0 NA
197 37.67 temperature 20.0 14400 < th dose independent rect. 21 1
207 37.68 temperature 30.0 10 < th dose dependent sin 3 NA
210 37.69 temperature 20.0 14400 > th dose independent rect. 21 1
226 37.70 temperature 25.0 270 > th dose dependent rect. 18 17
227 37.70 radiation 1.0 1440 < th dose dependent rect. 7 20
230 37.71 radiation 1.0 1440 < th dose independent rect. 2 16
233 37.71 temperature 30.0 90 < th dose dependent rect. 5 12
244 37.72 radiation 1.0 1440 < th dose independent rect. 4 14
276 37.76 radiation 1.0 1440 > th dose independent rect. 11 1
292 37.79 radiation 1.0 1440 > th dose independent rect. 6 23
308 37.80 radiation 1.0 1440 < th dose dependent rect. 2 16
310 37.80 radiation 1.0 1440 < th dose dependent rect. 23 19
323 37.81 humidity 90.0 720 > th dose dependent rect. 6 18
335 37.83 radiation 1.0 720 < th dose dependent rect. 5 8
341 37.85 radiation 1.0 720 < th dose independent rect. 5 8
342 37.85 radiation 1.0 1440 > th dose independent rect. 4 14
357 37.86 wind 7.0 43200 > th dose dependent rect. 17 1
374 37.88 radiation 1.0 1440 < th dose independent rect. 17 23
393 37.90 radiation 1.0 720 < th dose dependent rect. 5 5
404 37.93 precipitation 0.1 14400 > th dose independent rect. 17 5
405 37.93 precipitation 0.1 14400 < th dose independent rect. 17 5
408 37.93 precipitation 0.1 14400 < th dose dependent rect. 17 5
410 37.93 temperature 25.0 270 > th dose dependent rect. 21 14
411 37.94 temperature 25.0 270 > th dose independent rect. 1 10
415 37.94 precipitation 0.1 14400 > th dose dependent rect. 17 14
422 37.95 temperature 30.0 90 < th dose dependent rect. 24 17
437 37.97 precipitation 0.1 720 > th dose independent rect. 20 8
442 37.97 radiation 1.0 1440 < th dose independent rect. 11 23
482 37.99 radiation 1.0 1440 < th dose independent no NA NA
512 38.00 radiation 1.0 1440 < th dose independent rect. 11 7
519 38.00 radiation 1.0 1440 < th dose independent rect. 9 23
528 38.01 radiation 1.0 1440 > th dose independent rect. 7 9
534 38.01 precipitation 0.1 4320 > th dose dependent sin 23 NA
561 38.04 radiation 1.0 1440 > th dose independent rect. 17 23
573 38.05 radiation 1.0 1440 > th dose independent rect. 9 9
636 38.10 radiation 1.0 1440 > th dose independent rect. 11 7
655 38.11 wind 5.0 14400 > th dose independent rect. 20 1
663 38.11 radiation 1.0 1440 > th dose independent rect. 11 23
671 38.12 radiation 1.0 1440 > th dose independent no NA NA
727 38.12 radiation 1.0 1440 > th dose independent rect. 9 23
735 38.12 wind 9.0 43200 > th dose dependent rect. 14 7
743 38.13 precipitation 0.1 14400 > th dose dependent rect. 4 19
744 38.14 wind 5.0 14400 < th dose independent rect. 20 1
754 38.14 precipitation 0.1 14400 > th dose dependent rect. 8 15
769 38.15 precipitation 0.1 14400 > th dose dependent rect. 10 13
773 38.15 precipitation 0.1 14400 > th dose dependent rect. 6 17
801 38.17 radiation 1.0 720 > th dose independent rect. 17 20
811 38.17 temperature 30.0 10 < th dose dependent rect. 24 18
931 38.23 temperature 20.0 14400 > th dose independent sin 17 NA
952 38.24 temperature 25.0 4320 > th dose independent rect. 5 1
961 38.24 humidity 90.0 720 > th dose dependent rect. 21 2
978 38.25 wind 7.0 43200 > th dose independent rect. 17 4
983 38.25 radiation 1.0 1440 < th dose independent rect. 11 18
1000 38.26 wind 7.0 43200 < th dose independent rect. 17 4