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Os06g0659200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Intron maturase, type II family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0223) R2 : 0.584
β1 : -1.32 (0.0816) R2dD : 0.249 R2D : 0.153
β2 : 1.02 (0.0556) R2dC : 0.306 R2C : 0.282
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.448 (0.0476) R2dN8 : 0.108 R2N8 : 0.0297
σ : 0.419
deviance : 80.07
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_____
C
peak time of C : 20.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.19 0.368 11 -1.9 1.02 0.036 -0.817 3.34 -0.622 20.7 19.83 3373 -- --
60.27 0.362 11 -1.99 1.05 -1.13 -0.905 -- -0.623 20.7 14.28 11275 -- --
63.17 0.37 11 -1.88 1.01 0.0794 -- 3.4 -0.63 20.8 20.03 3508 -- --
62.6 0.369 11 -1.97 1.02 -1.13 -- -- -0.619 20.8 14.24 11144 -- --
121.34 0.513 11 -1.95 -- 0.00883 -- 3.38 -0.655 -- 19.98 3645 -- --
78.04 0.414 10.9 -1.35 1.01 -- -0.782 -- -0.447 20.8 -- -- -- --
80.07 0.419 10.9 -1.32 1.02 -- -- -- -0.448 20.8 -- -- -- --
121.22 0.513 10.9 -2.04 -- -1.05 -- -- -0.604 -- 14.6 15088 -- --
94.95 0.454 10.8 -- 1.03 0.905 -- -- -0.0293 20.8 33.31 47520 -- --
138.69 0.55 10.9 -1.32 -- -- -- -- -0.455 -- -- -- -- --
126.17 0.525 10.9 -- 1.02 -- -- -- -0.3 20.7 -- -- -- --
154.71 0.579 10.8 -- -- 0.883 -- -- -0.0439 -- 46.28 47520 -- --
184.89 0.635 10.9 -- -- -- -- -- -0.308 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.99 temperature 20 270 > th dose independent rect. 6 21
2 57.13 temperature 20 270 > th dose independent rect. 7 19
4 57.32 temperature 20 14400 > th dose independent rect. 17 1
6 57.34 temperature 30 270 < th dose dependent rect. 11 20
8 57.41 temperature 20 14400 > th dose independent rect. 11 7
10 57.43 temperature 20 14400 < th dose independent rect. 16 2
13 57.48 temperature 20 14400 < th dose independent rect. 11 7
21 57.55 temperature 20 14400 < th dose independent rect. 12 1
35 57.72 temperature 20 14400 > th dose independent rect. 12 1
52 57.88 humidity 90 14400 > th dose independent rect. 12 1
53 57.88 temperature 20 14400 < th dose dependent rect. 17 1
54 57.89 humidity 90 14400 < th dose independent rect. 12 1
60 57.91 temperature 20 14400 < th dose dependent rect. 8 1
88 58.10 temperature 20 14400 < th dose dependent rect. 16 4
89 58.10 temperature 20 14400 < th dose dependent rect. 7 11
93 58.12 temperature 20 14400 < th dose dependent rect. 7 6
108 58.17 humidity 70 43200 < th dose independent rect. 6 2
129 58.24 temperature 20 14400 > th dose independent rect. 9 1
130 58.24 radiation 20 14400 < th dose independent rect. 17 2
142 58.29 temperature 20 14400 < th dose independent rect. 9 1
148 58.31 temperature 15 14400 > th dose independent rect. 4 1
169 58.36 radiation 20 43200 < th dose independent rect. 17 14
187 58.42 radiation 10 43200 < th dose independent rect. 5 1
194 58.45 temperature 15 14400 > th dose independent rect. 20 1
200 58.46 temperature 15 14400 < th dose independent rect. 4 1
205 58.47 humidity 70 43200 > th dose independent rect. 6 1
292 58.70 temperature 20 14400 < th dose dependent sin 22 NA
297 58.72 humidity 90 14400 > th dose dependent rect. 12 1
310 58.77 humidity 60 43200 < th dose independent rect. 17 18
322 58.83 radiation 1 43200 > th dose dependent rect. 18 11
326 58.85 humidity 50 43200 > th dose independent rect. 9 2
327 58.85 radiation 20 14400 < th dose independent rect. 17 5
342 58.90 humidity 50 43200 < th dose independent rect. 10 1
360 58.96 radiation 1 43200 > th dose dependent rect. 18 1
379 59.01 humidity 90 14400 < th dose independent rect. 5 1
395 59.04 humidity 60 43200 > th dose independent rect. 18 17
397 59.04 radiation 1 43200 < th dose dependent rect. 8 1
402 59.06 radiation 1 43200 > th dose independent rect. 8 1
403 59.06 radiation 1 43200 < th dose independent rect. 8 1
405 59.06 humidity 60 43200 > th dose independent rect. 7 4
412 59.08 radiation 40 43200 < th dose dependent rect. 18 4
430 59.10 radiation 40 43200 < th dose dependent rect. 18 1
435 59.12 humidity 60 43200 < th dose independent rect. 7 4
453 59.16 wind 7 43200 > th dose independent rect. 5 1
454 59.16 humidity 70 43200 < th dose independent rect. 20 1
461 59.17 radiation 1 43200 < th dose dependent rect. 8 3
464 59.18 radiation 1 43200 < th dose independent rect. 10 1
466 59.18 radiation 1 43200 < th dose dependent rect. 10 1
474 59.19 humidity 70 43200 > th dose independent rect. 20 1
487 59.22 humidity 60 43200 > th dose independent rect. 2 9
510 59.26 radiation 40 43200 < th dose independent rect. 15 17
516 59.28 radiation 1 43200 > th dose independent rect. 10 1
525 59.29 humidity 60 43200 < th dose independent rect. 2 9
532 59.30 wind 3 43200 > th dose independent rect. 15 1
533 59.30 wind 1 43200 < th dose independent rect. 12 1
540 59.31 wind 9 14400 > th dose independent rect. 22 6
543 59.31 humidity 60 43200 > th dose independent rect. 22 13
544 59.31 wind 5 43200 < th dose dependent rect. 15 1
547 59.32 radiation 1 43200 < th dose independent rect. 8 3
551 59.33 temperature 15 14400 < th dose independent rect. 20 1
553 59.33 radiation 40 43200 < th dose independent rect. 15 1
556 59.33 temperature 10 43200 > th dose independent rect. 10 4
573 59.35 radiation 1 43200 > th dose independent rect. 8 3
574 59.35 radiation 40 43200 < th dose independent rect. 15 4
582 59.36 wind 9 14400 > th dose dependent rect. 21 7
589 59.38 wind 3 43200 < th dose independent rect. 15 1
591 59.38 radiation 20 14400 < th dose independent rect. 17 8
592 59.38 humidity 60 43200 < th dose dependent rect. 10 1
601 59.39 humidity 60 43200 < th dose independent rect. 22 13
603 59.39 radiation 10 43200 < th dose dependent rect. 4 1
615 59.41 radiation 40 43200 < th dose independent rect. 15 10
644 59.46 wind 1 43200 > th dose independent rect. 9 3
657 59.47 humidity 70 43200 < th dose dependent rect. 8 2
664 59.48 temperature 15 14400 > th dose independent rect. 20 10
693 59.52 humidity 50 43200 > th dose independent rect. 8 11
707 59.53 humidity 50 43200 > th dose independent rect. 8 14
716 59.54 wind 1 43200 > th dose independent rect. 10 1
719 59.54 wind 3 43200 > th dose independent rect. 15 3
754 59.57 wind 7 43200 < th dose independent rect. 5 1
772 59.57 humidity 90 14400 > th dose dependent rect. 11 3
777 59.58 wind 1 43200 > th dose independent rect. 12 1
803 59.60 humidity 50 43200 > th dose independent sin 18 NA
805 59.60 wind 1 43200 < th dose independent rect. 9 4
811 59.61 wind 9 14400 > th dose independent rect. 22 3
822 59.61 temperature 10 270 > th dose dependent rect. 6 21
823 59.62 temperature 15 14400 > th dose independent sin 8 NA
868 59.64 radiation 40 43200 < th dose independent rect. 24 8
869 59.64 humidity 50 43200 < th dose independent rect. 8 11
896 59.67 humidity 50 43200 > th dose independent rect. 13 6
933 59.68 humidity 50 43200 > th dose independent rect. 13 23
937 59.69 temperature 15 14400 > th dose independent rect. 23 1
977 59.70 wind 9 14400 > th dose dependent rect. 22 2
979 59.70 wind 9 14400 > th dose dependent rect. 22 4