Os06g0644800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mannose-6-phosphate receptor, binding domain containing protein.
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Os06g0644800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mannose-6-phosphate receptor, binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.8 | 0.252 | 11.2 | -0.396 | 0.62 | 0.176 | -0.0757 | -1.27 | -0.13 | 23.8 | 29.99 | 1825 | -- | -- |
| 31.34 | 0.261 | 11.2 | -0.46 | 0.651 | 0.151 | -0.0618 | -- | -0.141 | 23.9 | 39.99 | 1880 | -- | -- |
| 28.82 | 0.25 | 11.2 | -0.392 | 0.621 | 0.177 | -- | -1.29 | -0.13 | 23.8 | 29.98 | 1825 | -- | -- |
| 30.91 | 0.261 | 11.2 | -0.523 | 0.621 | 0.501 | -- | -- | -0.197 | 0.0777 | 59.9 | 1463 | -- | -- |
| 47.68 | 0.323 | 11.2 | -0.478 | -- | 0.424 | -- | -0.524 | -0.172 | -- | 29.98 | 1825 | -- | -- |
| 31.93 | 0.265 | 11.2 | -0.492 | 0.648 | -- | -0.207 | -- | -0.184 | 0.107 | -- | -- | -- | -- |
| 32.12 | 0.265 | 11.2 | -0.484 | 0.648 | -- | -- | -- | -0.183 | 0.0756 | -- | -- | -- | -- |
| 48.8 | 0.327 | 11.2 | -0.452 | -- | 0.42 | -- | -- | -0.171 | -- | 29.98 | 1825 | -- | -- |
| 37.2 | 0.284 | 11.2 | -- | 0.641 | 0.214 | -- | -- | -0.143 | 0.00907 | 60.07 | 2579 | -- | -- |
| 58.58 | 0.358 | 11.2 | -0.464 | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
| 38.29 | 0.289 | 11.2 | -- | 0.642 | -- | -- | -- | -0.129 | 0.0335 | -- | -- | -- | -- |
| 54.2 | 0.344 | 11.2 | -- | -- | 0.425 | -- | -- | -0.12 | -- | 29.98 | 1825 | -- | -- |
| 64.25 | 0.374 | 11.2 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 4 | 27.48 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 11 | 27.57 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 14 | 27.63 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 15 | 27.63 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 17 | 27.64 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 32 | 27.70 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 125 | 27.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 130 | 27.84 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 149 | 27.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 166 | 27.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 183 | 27.92 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 186 | 27.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 213 | 27.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 236 | 27.96 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 260 | 27.98 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 271 | 27.98 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 287 | 28.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 344 | 28.05 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 345 | 28.05 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 368 | 28.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 454 | 28.11 | temperature | 20.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 466 | 28.12 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 506 | 28.15 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 638 | 28.22 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 670 | 28.24 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 762 | 28.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 783 | 28.31 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 784 | 28.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 882 | 28.36 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 909 | 28.37 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 941 | 28.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |