Os06g0644100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Carboxypeptidase regulatory region domain containing protein.
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Os06g0644100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Carboxypeptidase regulatory region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.24 | 0.326 | 13 | 0.839 | 0.411 | 0.755 | -0.0156 | -0.331 | 0.377 | 4.13 | 21.3 | 2584 | -- | -- |
| 48.47 | 0.324 | 13 | 0.913 | 0.412 | 0.775 | -0.0292 | -- | 0.386 | 4.01 | 21.3 | 2621 | -- | -- |
| 48.23 | 0.323 | 13 | 0.839 | 0.411 | 0.756 | -- | -0.331 | 0.377 | 4.12 | 21.3 | 2589 | -- | -- |
| 48.45 | 0.324 | 13 | 0.921 | 0.411 | 0.786 | -- | -- | 0.395 | 4.1 | 21.39 | 2617 | -- | -- |
| 57.39 | 0.353 | 13 | 0.857 | -- | 0.757 | -- | -0.327 | 0.389 | -- | 21.3 | 2589 | -- | -- |
| 64.77 | 0.377 | 13 | 1.32 | 0.455 | -- | -0.12 | -- | 0.633 | 3.79 | -- | -- | -- | -- |
| 64.82 | 0.377 | 13 | 1.32 | 0.454 | -- | -- | -- | 0.634 | 3.79 | -- | -- | -- | -- |
| 57.53 | 0.353 | 13 | 0.913 | -- | 0.835 | -- | -- | 0.392 | -- | 21.33 | 2609 | -- | -- |
| 53.8 | 0.342 | 13 | -- | 0.458 | 1.26 | -- | -- | 0.25 | 3.75 | 17.1 | 47520 | -- | -- |
| 76.19 | 0.408 | 13 | 1.34 | -- | -- | -- | -- | 0.646 | -- | -- | -- | -- | -- |
| 110.87 | 0.493 | 13 | -- | 0.48 | -- | -- | -- | 0.487 | 3.76 | -- | -- | -- | -- |
| 64.37 | 0.374 | 13.1 | -- | -- | 1.3 | -- | -- | 0.238 | -- | 17.03 | 47280 | -- | -- |
| 123.6 | 0.519 | 13 | -- | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 47.62 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 47.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 44 | 48.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 45 | 48.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 98 | 48.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 109 | 48.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 254 | 48.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 263 | 48.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 286 | 48.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 307 | 48.98 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 322 | 49.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 339 | 49.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 381 | 49.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 412 | 49.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 488 | 49.45 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 500 | 49.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 517 | 49.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 667 | 49.75 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 703 | 49.81 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 707 | 49.81 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 791 | 49.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 795 | 49.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 831 | 50.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 856 | 50.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |