Os06g0639300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os06g0639300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 197.5 | 0.66 | 5.47 | 0.617 | 4.16 | -1.76 | 0.309 | -4.54 | 0.341 | 20.2 | 31.14 | 267 | 15.8 | -- |
| 220.92 | 0.692 | 5.56 | 0.026 | 4.53 | -1.66 | -0.38 | -- | 0.223 | 20.6 | 30.89 | 190 | 12.7 | -- |
| 197.74 | 0.655 | 5.47 | 0.598 | 4.15 | -1.75 | -- | -4.42 | 0.336 | 20.2 | 31.18 | 265 | 15.8 | -- |
| 220.5 | 0.692 | 5.57 | -0.003 | 4.59 | -1.75 | -- | -- | 0.183 | 20.5 | 30.76 | 171 | 12.8 | -- |
| 290.92 | 0.794 | 5.45 | 0.0865 | -- | -5.04 | -- | -3.31 | 0.189 | -- | 44.13 | 244 | 22.8 | -- |
| 255.61 | 0.75 | 5.5 | 0.318 | 4.01 | -- | 0.0895 | -- | 0.393 | 20.5 | -- | -- | -- | -- |
| 255.64 | 0.749 | 5.5 | 0.315 | 4.01 | -- | -- | -- | 0.393 | 20.5 | -- | -- | -- | -- |
| 252 | 0.739 | 5.48 | -0.24 | -- | -5.06 | -- | -- | 0.1 | -- | 104.6 | 1123 | 7.07 | -- |
| 220.42 | 0.691 | 5.57 | -- | 4.61 | -1.77 | -- | -- | 0.184 | 20.6 | 30.69 | 149 | 12.6 | -- |
| 1155.63 | 1.59 | 5.4 | 0.299 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 258.25 | 0.752 | 5.51 | -- | 4.01 | -- | -- | -- | 0.358 | 20.5 | -- | -- | -- | -- |
| 245.17 | 0.729 | 5.43 | -- | -- | -4.57 | -- | -- | 0.21 | -- | 157.1 | 1126 | 6.97 | -- |
| 1157.98 | 1.59 | 5.41 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.46 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 4 | 199.66 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |
| 7 | 200.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 10 | 201.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 48 | 208.26 | temperature | 25 | 270 | < th | dose independent | rect. | 10 | 11 |
| 52 | 208.51 | temperature | 25 | 270 | < th | dose independent | sin | 21 | NA |
| 53 | 208.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 17 |
| 65 | 209.72 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 18 |
| 70 | 210.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 121 | 211.68 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 16 |
| 128 | 211.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 11 |
| 133 | 212.20 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 137 | 212.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 9 |
| 144 | 212.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 224 | 214.14 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 10 |
| 229 | 214.25 | temperature | 10 | 720 | > th | dose dependent | sin | 20 | NA |
| 240 | 214.48 | temperature | 10 | 30 | > th | dose dependent | sin | 18 | NA |
| 252 | 214.60 | temperature | 10 | 10 | > th | dose dependent | sin | 14 | NA |
| 284 | 215.20 | temperature | 10 | 270 | > th | dose dependent | sin | 16 | NA |
| 302 | 215.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 328 | 215.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 330 | 215.76 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 10 |
| 364 | 216.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 12 |
| 454 | 216.92 | temperature | 25 | 90 | > th | dose independent | rect. | 12 | 10 |
| 463 | 217.07 | temperature | 25 | 10 | < th | dose independent | sin | 19 | NA |
| 649 | 218.80 | temperature | 25 | 10 | > th | dose independent | rect. | 12 | 10 |
| 693 | 219.19 | radiation | 40 | 270 | < th | dose independent | rect. | 6 | 16 |
| 694 | 219.19 | wind | 5 | 270 | < th | dose independent | rect. | 11 | 18 |
| 723 | 219.38 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 19 |
| 805 | 219.71 | temperature | 25 | 90 | > th | dose independent | rect. | 12 | 18 |
| 832 | 219.85 | radiation | 40 | 270 | < th | dose independent | rect. | 5 | 18 |
| 840 | 219.92 | wind | 5 | 270 | < th | dose independent | rect. | 12 | 16 |
| 845 | 219.95 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 19 |
| 992 | 220.73 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 9 |