Os06g0639000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0639000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.18 | 0.24 | 11.8 | 1.02 | 0.498 | 0.491 | 0.71 | 1.69 | 0.465 | 3.99 | 19.31 | 690 | -- | -- |
| 28.45 | 0.248 | 11.8 | 0.674 | 0.554 | 0.581 | 0.614 | -- | 0.362 | 3.86 | 19.41 | 526 | -- | -- |
| 26.85 | 0.241 | 11.8 | 1.05 | 0.393 | 0.467 | -- | 1.72 | 0.473 | 3.73 | 18.76 | 970 | -- | -- |
| 29.22 | 0.252 | 11.8 | 0.645 | 0.39 | 0.545 | -- | -- | 0.351 | 3.9 | 20.29 | 975 | -- | -- |
| 34.51 | 0.274 | 11.8 | 1.06 | -- | 0.554 | -- | 1.72 | 0.471 | -- | 18.6 | 1104 | -- | -- |
| 34.48 | 0.275 | 11.8 | 0.82 | 0.434 | -- | 0.676 | -- | 0.467 | 2.49 | -- | -- | -- | -- |
| 36.06 | 0.281 | 11.8 | 0.802 | 0.441 | -- | -- | -- | 0.463 | 2.79 | -- | -- | -- | -- |
| 36.44 | 0.281 | 11.8 | 0.64 | -- | 0.574 | -- | -- | 0.365 | -- | 22.53 | 1126 | -- | -- |
| 37.17 | 0.284 | 11.9 | -- | 0.393 | 0.759 | -- | -- | 0.252 | 3.23 | 18.18 | 3835 | -- | -- |
| 47.32 | 0.321 | 11.8 | 0.821 | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
| 53.01 | 0.341 | 11.8 | -- | 0.456 | -- | -- | -- | 0.373 | 2.81 | -- | -- | -- | -- |
| 43.39 | 0.307 | 11.9 | -- | -- | 0.719 | -- | -- | 0.149 | -- | 16.07 | 47520 | -- | -- |
| 65.08 | 0.377 | 11.8 | -- | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 4 | 24.81 | temperature | 25 | 720 | < th | dose dependent | sin | 17 | NA |
| 6 | 24.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 14 |
| 18 | 24.94 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 23 | 24.99 | temperature | 15 | 720 | > th | dose dependent | sin | 14 | NA |
| 55 | 25.24 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 57 | 25.25 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 58 | 25.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 70 | 25.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 103 | 25.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 122 | 25.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 157 | 25.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 214 | 25.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 315 | 25.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 336 | 25.78 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 19 |
| 363 | 25.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 629 | 26.03 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 770 | 26.13 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 781 | 26.14 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 808 | 26.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 829 | 26.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |