Os06g0635700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0635700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.83 | 0.692 | 4.73 | 4.33 | 0.102 | 148 | -0.518 | 311 | -0.0182 | 8.91 | 14.96 | 1594 | -- | -- |
| 232.1 | 0.715 | 2.78 | -0.0498 | 0.0692 | 0.0115 | -0.203 | -- | -0.0728 | 6.69 | 15.2 | 1704 | -- | -- |
| 217.73 | 0.687 | 4.73 | 4.31 | 0.104 | 148 | -- | 311 | -0.0199 | 8.59 | 14.95 | 1594 | -- | -- |
| 224.43 | 0.698 | 2.77 | 0.17 | 0.195 | 0.743 | -- | -- | 0.0329 | 8 | 17.4 | 3051 | -- | -- |
| 218.33 | 0.688 | 4.73 | 4.31 | -- | 148 | -- | 311 | -0.0197 | -- | 14.95 | 1594 | -- | -- |
| 232.1 | 0.714 | 2.78 | -0.0503 | 0.0692 | -- | -0.203 | -- | -0.073 | 6.67 | -- | -- | -- | -- |
| 232.2 | 0.714 | 2.78 | -0.0534 | 0.0684 | -- | -- | -- | -0.0723 | 6.84 | -- | -- | -- | -- |
| 223.15 | 0.696 | 2.76 | 0.251 | -- | 1.02 | -- | -- | 0.0461 | -- | 17.34 | 3115 | -- | -- |
| 224.18 | 0.697 | 2.77 | -- | 0.0805 | 0.829 | -- | -- | 0.00341 | 7.5 | 17.46 | 3120 | -- | -- |
| 232.45 | 0.712 | 2.78 | -0.0519 | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
| 232.28 | 0.713 | 2.78 | -- | 0.0678 | -- | -- | -- | -0.0664 | 6.89 | -- | -- | -- | -- |
| 224.48 | 0.698 | 2.77 | -- | -- | 0.845 | -- | -- | 0.004 | -- | 17.38 | 3115 | -- | -- |
| 232.52 | 0.712 | 2.78 | -- | -- | -- | -- | -- | -0.0653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.98 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 5 | 206.97 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 6 | 207.02 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 9 | 207.90 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 21 | 207.94 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 38 | 208.46 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 39 | 208.47 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 41 | 208.49 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 105 | 210.29 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 153 | 211.22 | temperature | 20.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 187 | 212.08 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 191 | 212.13 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 197 | 212.25 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 10 |
| 200 | 212.33 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 230 | 213.05 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 303 | 214.18 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 318 | 214.35 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 10 |
| 320 | 214.40 | temperature | 15.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 334 | 214.55 | temperature | 20.0 | 30 | < th | dose dependent | sin | 22 | NA |
| 335 | 214.55 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 372 | 214.99 | temperature | 15.0 | 720 | < th | dose independent | sin | 7 | NA |
| 387 | 215.21 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 399 | 215.38 | wind | 1.0 | 90 | < th | dose dependent | rect. | 16 | 5 |
| 403 | 215.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 10 |
| 404 | 215.46 | temperature | 15.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 408 | 215.55 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 6 |
| 411 | 215.55 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 442 | 215.81 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 460 | 215.94 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 461 | 215.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 5 |
| 465 | 215.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 5 |
| 525 | 216.36 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 532 | 216.37 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 22 |
| 533 | 216.37 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 581 | 216.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 12 |
| 582 | 216.73 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 587 | 216.73 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 593 | 216.80 | temperature | 15.0 | 720 | > th | dose independent | sin | 9 | NA |
| 616 | 216.88 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 640 | 217.11 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 14 |
| 642 | 217.13 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 651 | 217.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 21 |
| 662 | 217.26 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 16 | 6 |
| 666 | 217.28 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 692 | 217.41 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 14 | 6 |
| 699 | 217.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 713 | 217.59 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 718 | 217.60 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 5 |
| 768 | 217.79 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 786 | 217.82 | temperature | 20.0 | 90 | < th | dose independent | sin | 23 | NA |
| 810 | 217.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 816 | 217.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 20 |
| 817 | 217.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 826 | 218.00 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 14 |
| 832 | 218.02 | radiation | 20.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 838 | 218.05 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 846 | 218.05 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 19 |
| 847 | 218.05 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 849 | 218.05 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 850 | 218.07 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 3 |
| 853 | 218.07 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 3 |
| 883 | 218.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 21 |
| 884 | 218.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 21 |
| 937 | 218.36 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 14 | 2 |
| 939 | 218.36 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 996 | 218.50 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 19 |