Os06g0632200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0632200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.23 | 0.55 | 9.67 | -0.867 | 0.805 | 1.14 | -1.09 | 5.81 | -0.162 | 22.1 | 19.2 | 7319 | -- | -- |
| 158.89 | 0.587 | 9.49 | -0.591 | 0.803 | -0.575 | -1.16 | -- | -0.256 | 22.1 | 23.17 | 13850 | -- | -- |
| 141.34 | 0.554 | 9.68 | -0.832 | 0.809 | 1.19 | -- | 5.97 | -0.176 | 22.2 | 19.1 | 7868 | -- | -- |
| 154.99 | 0.58 | 9.47 | -0.86 | 0.83 | -0.925 | -- | -- | -0.129 | 22 | 8.907 | 47520 | -- | -- |
| 181.32 | 0.627 | 9.67 | -0.855 | -- | 1.12 | -- | 5.95 | -0.192 | -- | 19.1 | 7783 | -- | -- |
| 166.23 | 0.604 | 9.42 | -0.229 | 0.802 | -- | -1.08 | -- | 0.0566 | 22.2 | -- | -- | -- | -- |
| 170.85 | 0.612 | 9.42 | -0.187 | 0.806 | -- | -- | -- | 0.0587 | 22.2 | -- | -- | -- | -- |
| 193.85 | 0.648 | 9.44 | -0.863 | -- | -0.956 | -- | -- | -0.124 | -- | 8.9 | 47520 | -- | -- |
| 165.5 | 0.599 | 9.43 | -- | 0.802 | -0.448 | -- | -- | 0.0323 | 22.2 | 10.16 | 47520 | -- | -- |
| 210.33 | 0.678 | 9.4 | -0.176 | -- | -- | -- | -- | 0.0606 | -- | -- | -- | -- | -- |
| 171.78 | 0.613 | 9.42 | -- | 0.805 | -- | -- | -- | 0.0796 | 22.2 | -- | -- | -- | -- |
| 204.09 | 0.665 | 9.41 | -- | -- | -0.472 | -- | -- | 0.0347 | -- | 8.5 | 47520 | -- | -- |
| 211.14 | 0.678 | 9.39 | -- | -- | -- | -- | -- | 0.0801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 4 | 130.33 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 14 | 131.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 27 | 132.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 28 | 132.50 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 32 | 132.77 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 48 | 133.64 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 50 | 133.67 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 57 | 134.02 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 59 | 134.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 60 | 134.06 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 69 | 134.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 72 | 134.41 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 77 | 134.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 78 | 134.56 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 85 | 134.66 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 86 | 134.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 101 | 134.87 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 118 | 135.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 122 | 135.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 166 | 135.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 171 | 135.98 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 185 | 136.10 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 5 | 15 |
| 229 | 136.72 | wind | 3.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 249 | 136.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 269 | 137.16 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 279 | 137.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 280 | 137.22 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 0 | NA |
| 288 | 137.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 301 | 137.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 302 | 137.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 308 | 137.41 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 314 | 137.44 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 323 | 137.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 328 | 137.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 340 | 137.57 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 367 | 137.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 413 | 137.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 415 | 137.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 438 | 138.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 441 | 138.05 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 457 | 138.10 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 486 | 138.19 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 508 | 138.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 555 | 138.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 570 | 138.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 592 | 138.54 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 616 | 138.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 620 | 138.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 646 | 138.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 654 | 138.67 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 666 | 138.72 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 670 | 138.72 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 693 | 138.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 709 | 138.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 761 | 138.99 | humidity | 90.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 770 | 139.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 776 | 139.04 | humidity | 80.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 794 | 139.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 837 | 139.23 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 840 | 139.23 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 845 | 139.24 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 856 | 139.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 858 | 139.27 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 859 | 139.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 930 | 139.49 | humidity | 90.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 941 | 139.51 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 15 | 9 |