Os06g0630300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0630300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.25 | 0.183 | 9.66 | -0.383 | 0.478 | 0.628 | -0.123 | -0.0666 | -0.0807 | 21.9 | 21.31 | 3052 | -- | -- |
| 15.2 | 0.182 | 9.66 | -0.358 | 0.48 | 0.626 | -0.126 | -- | -0.0796 | 21.8 | 21.4 | 2952 | -- | -- |
| 15.2 | 0.182 | 9.66 | -0.369 | 0.477 | 0.598 | -- | -0.118 | -0.0909 | 21.9 | 21.72 | 2951 | -- | -- |
| 15.24 | 0.182 | 9.66 | -0.344 | 0.478 | 0.615 | -- | -- | -0.0845 | 21.8 | 21.6 | 2952 | -- | -- |
| 25.07 | 0.233 | 9.64 | -0.188 | -- | 0.549 | -- | -0.135 | -0.0739 | -- | 22.3 | 847 | -- | -- |
| 25.43 | 0.236 | 9.61 | -0.0215 | 0.485 | -- | -0.134 | -- | 0.121 | 22 | -- | -- | -- | -- |
| 25.5 | 0.236 | 9.61 | -0.0164 | 0.486 | -- | -- | -- | 0.122 | 22 | -- | -- | -- | -- |
| 25.2 | 0.234 | 9.64 | -0.196 | -- | 0.561 | -- | -- | -0.0679 | -- | 22.24 | 852 | -- | -- |
| 16.42 | 0.189 | 9.65 | -- | 0.49 | 0.404 | -- | -- | 0.00639 | 22 | 22.3 | 1859 | -- | -- |
| 39.73 | 0.295 | 9.6 | -0.0102 | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
| 25.51 | 0.236 | 9.61 | -- | 0.486 | -- | -- | -- | 0.123 | 22 | -- | -- | -- | -- |
| 23.97 | 0.228 | 9.64 | -- | -- | 0.565 | -- | -- | -0.0743 | -- | 24.6 | 750 | -- | -- |
| 39.73 | 0.294 | 9.6 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 8 | 15.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 16 | 15.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 29 | 15.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 45 | 15.09 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 51 | 15.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 73 | 15.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 414 | 15.52 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 506 | 15.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 507 | 15.61 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 719 | 15.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 747 | 15.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 789 | 15.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 806 | 16.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |