Os06g0609800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0609800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.63 | 0.296 | 8.82 | 1.23 | 0.581 | 1 | 0.0897 | 0.191 | 0.263 | 1.92 | 18.32 | 343 | -- | -- |
| 39.65 | 0.293 | 8.82 | 1.19 | 0.579 | 1.01 | 0.0548 | -- | 0.252 | 1.96 | 18.5 | 350 | -- | -- |
| 39.61 | 0.293 | 8.82 | 1.23 | 0.565 | 1.02 | -- | 0.259 | 0.272 | 1.94 | 17.57 | 360 | -- | -- |
| 39.64 | 0.293 | 8.82 | 1.18 | 0.572 | 1.04 | -- | -- | 0.258 | 1.93 | 17.41 | 351 | -- | -- |
| 46.43 | 0.317 | 8.82 | 1.13 | -- | 1.04 | -- | -0.00471 | 0.242 | -- | 16.7 | 904 | -- | -- |
| 55.34 | 0.349 | 8.79 | 1.44 | 0.449 | -- | 0.296 | -- | 0.428 | 23.2 | -- | -- | -- | -- |
| 55.69 | 0.349 | 8.79 | 1.43 | 0.448 | -- | -- | -- | 0.426 | 23.4 | -- | -- | -- | -- |
| 46.42 | 0.317 | 8.82 | 1.13 | -- | 1.06 | -- | -- | 0.245 | -- | 16.57 | 904 | -- | -- |
| 72.25 | 0.396 | 8.86 | -- | 0.685 | 1.68 | -- | -- | 0.0684 | 2.78 | 15.32 | 369 | -- | -- |
| 68.25 | 0.386 | 8.78 | 1.44 | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
| 109.65 | 0.49 | 8.83 | -- | 0.463 | -- | -- | -- | 0.267 | 23.6 | -- | -- | -- | -- |
| 72.18 | 0.396 | 8.89 | -- | -- | 1.46 | -- | -- | -0.0672 | -- | 12.28 | 8212 | -- | -- |
| 123.16 | 0.518 | 8.82 | -- | -- | -- | -- | -- | 0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 14 | 36.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 98 | 38.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 112 | 38.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 129 | 38.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 145 | 39.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 152 | 39.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 154 | 39.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 169 | 39.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 195 | 39.37 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 254 | 39.72 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 283 | 39.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 10 |
| 315 | 39.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 331 | 40.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 335 | 40.04 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 382 | 40.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 490 | 40.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 505 | 40.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 547 | 40.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 563 | 40.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 582 | 40.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 649 | 40.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 659 | 40.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 854 | 40.90 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 18 |
| 879 | 40.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 908 | 40.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 922 | 40.95 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 5 |