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Os06g0604600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0234) R2 : 0.708
β1 : 0.784 (0.0853) R2dD : 0.0547 R2D : 0.0276
β2 : 2.5 (0.0796) R2dC : 1.09 R2C : 0.0482
β3 : 1.8 (0.0773) R2dE : 0.602 R2E : -0.474
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.246 (0.0497) R2dN8 : 0.0211 R2N8 : -0.000784
σ : 0.436
deviance : 87.44
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_____
C
peak time of C : 6.59
E
wheather : radiation
threshold : 10
memory length : 81
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 12
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
84.49 0.432 13.3 0.82 2.52 1.86 -1.56 -1.2 0.249 6.65 10 89 12.1 --
86.51 0.433 13.3 0.781 2.52 1.83 -0.668 -- 0.251 6.59 10 82 12 --
87.36 0.435 13.3 0.77 2.5 1.81 -- -0.195 0.237 6.61 10 84 12 --
87.44 0.436 13.3 0.784 2.5 1.8 -- -- 0.246 6.59 10 81 12 --
117.74 0.505 13.3 0.801 -- 2.38 -- -1.11 0.268 -- 8.105 845 11.4 --
126.73 0.528 13.3 0.738 1.68 -- -0.628 -- 0.203 4.13 -- -- -- --
127.84 0.529 13.3 0.745 1.67 -- -- -- 0.206 4.11 -- -- -- --
119.77 0.51 13.3 0.787 -- 2.37 -- -- 0.266 -- 7.67 845 11.5 --
103.22 0.473 13.3 -- 2.52 1.8 -- -- 0.174 6.53 9.976 76 12.1 --
279.65 0.781 13.3 0.812 -- -- -- -- 0.251 -- -- -- -- --
142.46 0.558 13.3 -- 1.69 -- -- -- 0.123 4.1 -- -- -- --
135.36 0.542 13.3 -- -- 2.34 -- -- 0.178 -- 9.966 833 11.1 --
297.06 0.804 13.4 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.60 radiation 10.0 90 < th dose dependent sin 18 NA
6 85.61 radiation 10.0 270 > th dose independent rect. 11 4
7 85.66 humidity 80.0 270 < th dose independent rect. 12 3
19 87.06 radiation 1.0 90 > th dose independent sin 20 NA
28 87.67 radiation 1.0 90 < th dose independent sin 20 NA
31 87.93 radiation 1.0 270 > th dose dependent rect. 12 3
65 89.90 radiation 1.0 90 > th dose dependent sin 15 NA
72 90.05 temperature 10.0 270 > th dose dependent rect. 2 9
81 90.52 humidity 90.0 270 < th dose dependent rect. 12 3
95 91.01 temperature 10.0 30 > th dose dependent rect. 18 18
107 91.56 wind 7.0 270 < th dose independent rect. 12 3
109 91.60 temperature 10.0 90 > th dose dependent rect. 17 20
112 91.67 wind 9.0 90 < th dose independent rect. 17 20
134 92.08 wind 9.0 270 < th dose independent rect. 15 20
135 92.11 humidity 50.0 90 > th dose independent rect. 17 20
149 92.20 atmosphere 995.0 90 > th dose independent rect. 17 20
150 92.24 temperature 10.0 270 > th dose dependent rect. 12 3
152 92.26 precipitation 0.1 270 < th dose independent rect. 11 4
153 92.26 precipitation 0.1 270 < th dose dependent rect. 11 4
157 92.34 precipitation 0.1 90 < th dose independent rect. 13 4
158 92.34 precipitation 0.1 90 < th dose dependent rect. 13 4
160 92.38 atmosphere 995.0 270 > th dose independent rect. 15 20
187 92.51 temperature 10.0 270 > th dose independent rect. 11 4
188 92.51 atmosphere 1015.0 270 < th dose independent rect. 11 4
189 92.51 temperature 10.0 270 > th dose independent rect. 15 20
193 92.60 temperature 25.0 270 > th dose independent rect. 12 3
197 92.66 humidity 90.0 10 < th dose independent rect. 12 6
200 92.69 temperature 10.0 90 > th dose independent rect. 13 4
202 92.69 atmosphere 1010.0 90 < th dose independent rect. 13 4
204 92.69 temperature 10.0 90 > th dose independent rect. 17 20
244 92.99 humidity 50.0 10 > th dose independent rect. 18 18
246 93.03 radiation 40.0 90 < th dose dependent rect. 17 20
254 93.16 wind 1.0 90 > th dose independent rect. 13 4
259 93.34 precipitation 0.1 270 < th dose independent rect. 15 20
261 93.34 precipitation 0.1 270 < th dose dependent rect. 15 20
262 93.36 radiation 10.0 90 < th dose dependent rect. 9 14
268 93.50 wind 1.0 270 > th dose independent rect. 11 4
274 93.54 humidity 90.0 270 < th dose dependent rect. 13 1
276 93.55 radiation 1.0 270 > th dose dependent rect. 11 19
277 93.56 atmosphere 995.0 270 > th dose independent rect. 11 4
307 93.73 humidity 80.0 10 < th dose independent rect. 14 4
325 94.03 wind 9.0 10 < th dose independent rect. 18 18
337 94.22 precipitation 0.1 90 < th dose independent rect. 17 20
338 94.22 precipitation 0.1 90 < th dose dependent rect. 17 20
344 94.36 wind 9.0 10 < th dose independent rect. 12 6
371 94.66 precipitation 0.1 10 < th dose independent rect. 12 6
373 94.66 precipitation 0.1 10 < th dose dependent rect. 12 6
374 94.69 temperature 25.0 10 > th dose independent rect. 14 4
381 94.78 atmosphere 995.0 10 > th dose independent rect. 18 18
386 94.82 temperature 10.0 10 > th dose independent rect. 12 6
388 94.82 atmosphere 1015.0 10 < th dose independent rect. 12 6
389 94.82 temperature 10.0 10 > th dose independent rect. 18 18
394 94.91 temperature 10.0 10 > th dose dependent rect. 14 4
412 95.11 wind 9.0 270 < th dose dependent rect. 12 3
420 95.14 temperature 20.0 270 > th dose independent rect. 3 8
443 95.25 wind 7.0 10 < th dose independent rect. 14 4
445 95.26 radiation 40.0 270 < th dose dependent rect. 6 14
446 95.27 wind 1.0 10 > th dose independent rect. 12 6
447 95.27 humidity 50.0 10 > th dose independent rect. 18 20
450 95.32 temperature 10.0 270 > th dose dependent rect. 13 1
469 95.41 humidity 50.0 270 > th dose independent rect. 12 3
499 95.53 atmosphere 995.0 270 > th dose dependent rect. 11 4
530 95.70 atmosphere 1015.0 90 < th dose independent rect. 17 20
532 95.73 radiation 40.0 90 < th dose independent rect. 17 20
544 95.86 atmosphere 995.0 90 > th dose dependent rect. 13 4
545 95.88 precipitation 0.1 270 < th dose independent rect. 13 1
546 95.88 precipitation 0.1 270 < th dose dependent rect. 13 1
548 95.91 radiation 20.0 90 < th dose dependent rect. 17 6
558 95.95 atmosphere 995.0 90 > th dose independent rect. 17 6
605 96.09 wind 1.0 90 > th dose independent rect. 17 6
610 96.10 radiation 1.0 90 > th dose dependent rect. 14 4
612 96.13 precipitation 0.1 10 < th dose independent rect. 18 18
613 96.13 precipitation 0.1 10 < th dose dependent rect. 18 18
639 96.26 radiation 1.0 90 < th dose independent rect. 8 15
644 96.28 atmosphere 995.0 270 > th dose independent rect. 13 1
647 96.28 humidity 50.0 90 > th dose independent rect. 17 6
649 96.29 precipitation 0.1 90 < th dose independent rect. 23 18
650 96.29 precipitation 0.1 90 < th dose dependent rect. 23 18
654 96.32 radiation 1.0 90 < th dose independent rect. 11 12
656 96.33 wind 9.0 90 < th dose independent rect. 17 6
663 96.36 radiation 10.0 90 < th dose independent rect. 17 6
664 96.36 radiation 40.0 10 < th dose independent rect. 18 18
667 96.39 wind 9.0 10 < th dose independent rect. 18 20
683 96.56 radiation 40.0 270 < th dose independent sin 15 NA
684 96.56 temperature 10.0 90 > th dose independent rect. 17 6
688 96.56 temperature 10.0 90 > th dose independent rect. 23 18
709 96.76 wind 9.0 270 < th dose dependent rect. 13 1
712 96.80 precipitation 0.1 10 < th dose independent rect. 14 4
713 96.80 precipitation 0.1 10 < th dose dependent rect. 14 4
719 96.85 atmosphere 1015.0 10 < th dose independent rect. 18 18
725 96.90 radiation 10.0 90 < th dose dependent rect. 15 8
729 96.94 atmosphere 995.0 10 > th dose independent rect. 18 20
744 96.98 temperature 10.0 10 > th dose independent rect. 14 4
746 96.98 atmosphere 1010.0 10 < th dose independent rect. 14 4
748 96.98 temperature 10.0 10 > th dose independent rect. 18 20
765 97.12 wind 1.0 10 > th dose independent rect. 14 4
775 97.15 radiation 30.0 270 > th dose dependent rect. 12 20
791 97.26 wind 9.0 90 < th dose independent rect. 23 18
793 97.27 atmosphere 1015.0 90 < th dose independent rect. 17 6
796 97.30 radiation 40.0 10 < th dose independent rect. 14 4
838 97.46 humidity 50.0 270 > th dose independent rect. 15 20
839 97.46 atmosphere 995.0 10 > th dose dependent rect. 12 6
849 97.50 radiation 1.0 270 < th dose independent rect. 11 9
855 97.56 temperature 20.0 270 > th dose independent rect. 5 15
908 97.80 humidity 90.0 10 < th dose dependent rect. 14 4
921 97.86 radiation 30.0 270 < th dose independent rect. 6 14
934 97.95 radiation 40.0 270 > th dose independent sin 15 NA
935 97.95 precipitation 0.1 90 < th dose independent rect. 17 6
936 97.95 precipitation 0.1 90 < th dose dependent rect. 17 6
964 98.04 atmosphere 995.0 10 > th dose independent rect. 12 6
967 98.05 atmosphere 995.0 270 > th dose dependent rect. 13 1
971 98.08 precipitation 0.1 10 < th dose independent rect. 18 20
974 98.08 precipitation 0.1 10 < th dose dependent rect. 18 20
979 98.11 atmosphere 1015.0 270 < th dose independent rect. 15 20