Os06g0595800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0595800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.63 | 0.44 | 10.7 | -0.836 | 0.795 | 1.71 | 0.531 | -4.35 | 0.12 | 4.79 | 25.83 | 1284 | -- | -- |
| 90.27 | 0.443 | 10.7 | 0.15 | 1.02 | 1.5 | 0.599 | -- | 0.143 | 5 | 21.6 | 2057 | -- | -- |
| 88.35 | 0.438 | 10.7 | -0.821 | 0.798 | 1.71 | -- | -4.29 | 0.132 | 4.82 | 25.92 | 1283 | -- | -- |
| 91.51 | 0.446 | 10.7 | 0.148 | 1.03 | 1.51 | -- | -- | 0.142 | 4.89 | 21.55 | 2019 | -- | -- |
| 118.78 | 0.508 | 10.8 | -0.709 | -- | 1.85 | -- | -3.36 | -0.0245 | -- | 23.92 | 1256 | -- | -- |
| 157.03 | 0.587 | 10.6 | 0.687 | 0.938 | -- | 0.702 | -- | 0.47 | 4.14 | -- | -- | -- | -- |
| 158.42 | 0.589 | 10.6 | 0.679 | 0.943 | -- | -- | -- | 0.466 | 4.15 | -- | -- | -- | -- |
| 122.56 | 0.516 | 10.7 | 0.199 | -- | 1.54 | -- | -- | 0.199 | -- | 23.32 | 1248 | -- | -- |
| 92.07 | 0.447 | 10.7 | -- | 1.03 | 1.57 | -- | -- | 0.11 | 4.9 | 21.27 | 2019 | -- | -- |
| 206.6 | 0.672 | 10.6 | 0.717 | -- | -- | -- | -- | 0.491 | -- | -- | -- | -- | -- |
| 170.59 | 0.611 | 10.6 | -- | 0.956 | -- | -- | -- | 0.39 | 4.14 | -- | -- | -- | -- |
| 123.57 | 0.518 | 10.7 | -- | -- | 1.57 | -- | -- | 0.182 | -- | 23.24 | 1253 | -- | -- |
| 220.18 | 0.693 | 10.6 | -- | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.67 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 2 | 89.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 6 | 89.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 13 | 89.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 65 | 89.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 76 | 89.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 82 | 89.46 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 84 | 89.46 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 92 | 89.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 194 | 90.36 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 205 | 90.48 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 214 | 90.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 215 | 90.57 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 226 | 90.65 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 232 | 90.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 237 | 90.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 251 | 90.79 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 253 | 90.80 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 279 | 90.91 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 305 | 91.07 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 329 | 91.19 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 391 | 91.43 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 401 | 91.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 427 | 91.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 447 | 91.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 462 | 91.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 473 | 91.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 495 | 91.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 523 | 91.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 531 | 91.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 576 | 92.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 580 | 92.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 587 | 92.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 591 | 92.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 592 | 92.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 599 | 92.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 603 | 92.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 604 | 92.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 627 | 92.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 642 | 92.19 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 662 | 92.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 687 | 92.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 700 | 92.29 | wind | 7 | 43200 | < th | dose independent | sin | 4 | NA |
| 731 | 92.31 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 735 | 92.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 22 |
| 804 | 92.35 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 875 | 92.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 892 | 92.52 | wind | 7 | 43200 | > th | dose independent | sin | 4 | NA |
| 996 | 92.72 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |