BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0595800 Os06g0595800|AK120657
(431 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62160.1 | chr3:23014333-23015808 REVERSE LENGTH=429 95 6e-20
AT3G48720.1 | chr3:18046527-18049295 FORWARD LENGTH=431 74 1e-13
AT3G47170.1 | chr3:17368672-17370494 REVERSE LENGTH=469 74 2e-13
AT5G63560.1 | chr5:25449517-25451234 FORWARD LENGTH=427 74 2e-13
AT5G17540.1 | chr5:5782061-5783682 REVERSE LENGTH=462 71 9e-13
AT5G41040.1 | chr5:16431448-16433086 FORWARD LENGTH=458 71 1e-12
AT2G25150.1 | chr2:10702582-10704266 REVERSE LENGTH=462 71 1e-12
AT3G03480.1 | chr3:828400-829863 REVERSE LENGTH=455 71 1e-12
AT5G57840.1 | chr5:23432945-23435161 REVERSE LENGTH=444 66 3e-11
AT5G07080.1 | chr5:2200353-2201975 FORWARD LENGTH=451 65 8e-11
AT1G28680.1 | chr1:10078222-10079763 FORWARD LENGTH=452 58 1e-08
AT2G23510.1 | chr2:10011517-10013533 REVERSE LENGTH=452 57 2e-08
AT1G24430.1 | chr1:8658190-8659497 REVERSE LENGTH=436 57 3e-08
AT1G27620.1 | chr1:9608444-9610432 FORWARD LENGTH=443 55 7e-08
AT5G48930.1 | chr5:19836654-19838092 REVERSE LENGTH=434 55 8e-08
AT1G03390.1 | chr1:841033-842418 REVERSE LENGTH=462 55 1e-07
AT2G19070.1 | chr2:8260185-8261958 REVERSE LENGTH=452 53 4e-07
AT1G65450.1 | chr1:24315875-24318895 FORWARD LENGTH=451 51 1e-06
AT4G15390.1 | chr4:8792941-8794281 REVERSE LENGTH=447 50 3e-06
AT1G32910.1 | chr1:11925426-11926908 FORWARD LENGTH=465 49 7e-06
>AT3G62160.1 | chr3:23014333-23015808 REVERSE LENGTH=429
Length = 428
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 25 ATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIAGRL 84
TP L LS +D P R ++HVF LVSYYP++GRL
Sbjct: 18 TTPSVVLDLSLIDNIPVLRCFARTIHVF----THGPDAARAIQEALAKALVSYYPLSGRL 73
Query: 85 AERGDGGELVVDCTGE-GVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYPASESHP 143
E + G+L +DCTG+ G+WF++A LE V Y + + + D+LLP ++ P
Sbjct: 74 KEL-NQGKLQIDCTGKTGIWFVDAVTDVKLESVGYFDNLMEIPYDDLLPDQIPKDDDAEP 132
Query: 144 EDSLILLVQVTQFACGGFVVGFRFSH 169
++ +QVTQF+CGGFV+G RF H
Sbjct: 133 ----LVQMQVTQFSCGGFVMGLRFCH 154
>AT3G48720.1 | chr3:18046527-18049295 FORWARD LENGTH=431
Length = 430
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P + TP G LS LD+ ++++L+ +K LV YYP+A
Sbjct: 19 PVSETPNGHYYLSNLDQ--NIAIIVKTLYYYKSESRTNQESYNVIKKSLSEVLVHYYPVA 76
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTY--PAS 139
GRL +G ++ V+CTGEGV +EA A+C +D ++ + ++ E L Y P +
Sbjct: 77 GRLTISPEG-KIAVNCTGEGVVVVEAEANCG---IDTIKEAISENRMETLEKLVYDVPGA 132
Query: 140 ESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
+ E + +VQVT F CGGFV+G SH
Sbjct: 133 RNILEIPPV-VVQVTNFKCGGFVLGLGMSH 161
>AT3G47170.1 | chr3:17368672-17370494 REVERSE LENGTH=469
Length = 468
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFK----GRXXXXXXXXXXXXXXXXXXLVSY 77
PS TP L LS +D P +++ L VF R LV Y
Sbjct: 22 PSKPTPDVTLSLSTIDNDPNNEVILDILCVFSPNPYVRDHTNYHPASFIQLALSNALVYY 81
Query: 78 YPIAGRLAERGDGGELVVDCT-GEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTY 136
YP+AG+L R L +DCT G+GV I+ATASC+L ++YLE ++ TY
Sbjct: 82 YPLAGKLHRRTSDQTLQLDCTQGDGVPLIKATASCTLSSLNYLESGNHLE-------ATY 134
Query: 137 PASESHPEDSLI--------LLVQVTQFACGGFVVGFRFSH 169
SH D+L L +Q+T+F CGG +G SH
Sbjct: 135 QLVPSH--DTLKGCNLGYRPLALQITKFTCGGMTIGSVHSH 173
>AT5G63560.1 | chr5:25449517-25451234 FORWARD LENGTH=427
Length = 426
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P++ TP G LS LD+ ++++ + FK LV YYP A
Sbjct: 19 PASETPKGLHYLSNLDQ--NIAIIVKTFYYFKSNSRSNEESYEVIKKSLSEVLVHYYPAA 76
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTY--PAS 139
GRL +G ++ VDCTGEGV +EA A+C +E + + +D+ E L Y P +
Sbjct: 77 GRLTISPEG-KIAVDCTGEGVVVVEAEANCGIEKIK--KAISEIDQPETLEKLVYDVPGA 133
Query: 140 ESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
+ E + +VQVT F CGGFV+G +H
Sbjct: 134 RNILEIPPV-VVQVTNFKCGGFVLGLGMNH 162
>AT5G17540.1 | chr5:5782061-5783682 REVERSE LENGTH=462
Length = 461
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P+ TP PLS +D R I ++ ++ LV YYP A
Sbjct: 19 PAKPTPRELKPLSDIDDQEGLRFHIPTIFFYRHNPTTNSDPVAVIRRALAETLVYYYPFA 78
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELL-PHPTYPASE 140
GRL E G +L VDCTGEGV FIEA A DV +E+ +KD L P P +
Sbjct: 79 GRLRE-GPNRKLAVDCTGEGVLFIEADA-----DVTLVEFE---EKDALKPPFPCFEELL 129
Query: 141 SHPEDSL------ILLVQVTQFACGGFVVGFRFSH 169
+ E S ++L+QVT+ CGGF+ R +H
Sbjct: 130 FNVEGSCEMLNTPLMLMQVTRLKCGGFIFAVRINH 164
>AT5G41040.1 | chr5:16431448-16433086 FORWARD LENGTH=458
Length = 457
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P + T G LS LD+ ++ +++ FK LV YYP+A
Sbjct: 43 PESETRKGLYFLSNLDQNIA--VIVRTIYCFKSEERGNEEAVQVIKKALSQVLVHYYPLA 100
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYP----------LMVDKDELL 131
GRL +G +L VDCT EGV F+EA A+C ++++ + P +VD +L
Sbjct: 101 GRLTISPEG-KLTVDCTEEGVVFVEAEANCKMDEIGDITKPDPETLGKLVYDVVDAKNIL 159
Query: 132 PHPTYPASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
P A QVT+F CGGFV+G +H
Sbjct: 160 EIPPVTA-------------QVTKFKCGGFVLGLCMNH 184
>AT2G25150.1 | chr2:10702582-10704266 REVERSE LENGTH=462
Length = 461
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
PS T L LS LD P + +++VFK LV YYP++
Sbjct: 23 PSKHTHCETLSLSTLDNDPFNEVMYATIYVFKANGKNLDDPVSLLRKALSELLVHYYPLS 82
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYPASES 141
G+L G+L + GEGV F AT++ L ++Y+E + D+ + P E
Sbjct: 83 GKLMRSESNGKLQLVYLGEGVPFEVATSTLDLSSLNYIE-----NLDDQVALRLVPEIEI 137
Query: 142 HPEDSLI---LLVQVTQFACGGFVVGFRFSH 169
E ++ L +QVT+FACGGF +G +H
Sbjct: 138 DYESNVCYHPLALQVTKFACGGFTIGTALTH 168
>AT3G03480.1 | chr3:828400-829863 REVERSE LENGTH=455
Length = 454
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P+ TP PLS +D R I + ++ LV YYP A
Sbjct: 29 PAKPTPRELKPLSDIDDQQGLRFQIPVIFFYRPNLSSDLDPVQVIKKALADALVYYYPFA 88
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYPASE- 140
GRL E + +L VDCTGEGV FIEA A +L +++ + D LL P +P E
Sbjct: 89 GRLRELSNR-KLAVDCTGEGVLFIEAEADVALAELE--------EADALL--PPFPFLEE 137
Query: 141 --------SHPEDSLILLVQVTQFACGGFVVGFRFSH 169
S ++ +LLVQVT+ C GF+ RF+H
Sbjct: 138 LLFDVEGSSDVLNTPLLLVQVTRLKCCGFIFALRFNH 174
>AT5G57840.1 | chr5:23432945-23435161 REVERSE LENGTH=444
Length = 443
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P+ TP L LS LD R + +L+ +K LV +YP A
Sbjct: 13 PAEETPTHNLWLSNLDLIQV-RLHMGTLYFYKPCSSSDRPNTQSLIEALSKVLVFFYPAA 71
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYPAS-E 140
GRL ++ G L V C GEGV F+EA + +++D+ L L D +L+P Y
Sbjct: 72 GRL-QKNTNGRLEVQCNGEGVLFVEAESDSTVQDIGLLTQSL--DLSQLVPTVDYAGDIS 128
Query: 141 SHPEDSLILLVQVTQFACGGFVVGFRFSH 169
S+P +LL QVT F CG VG H
Sbjct: 129 SYP----LLLFQVTYFKCGTICVGSSIHH 153
>AT5G07080.1 | chr5:2200353-2201975 FORWARD LENGTH=451
Length = 450
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFK--GRXXXXXXXXXXXXXXXXXXLVSYYP 79
PS ATP +L LS LD P L ++++V+ LV YYP
Sbjct: 24 PSKATPDVSLSLSTLDNDPYLETLAKTIYVYAPPSPNDHVHDPASLFQQALSDALVYYYP 83
Query: 80 IAGRLAERGDGGELVVDCT-GEGVWFIEATASCSLEDVDYLEYPLMVDKDELLP-HPTYP 137
+AG+L L + C+ EGV F+ ATA C+L ++YL+ + D +L+P P
Sbjct: 84 LAGKLHRGSHDHRLELRCSPAEGVPFVRATADCTLSSLNYLK-DMDTDLYQLVPCDVAAP 142
Query: 138 ASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
+ + +P L +Q+T FACGG + SH
Sbjct: 143 SGDYNP-----LALQITLFACGGLTLATALSH 169
>AT1G28680.1 | chr1:10078222-10079763 FORWARD LENGTH=452
Length = 451
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 74 LVSYYPIAGRLAERGDGGELVVDCT-GEGVWFIEATASCSLEDVDYLEYPLMVDKDELLP 132
LV YYP+AG L + C+ G+ V + AT +C+LE V YL+ P + L+P
Sbjct: 70 LVHYYPLAGSLRRSASDNRFELLCSAGQSVPLVNATVNCTLESVGYLDGPDPGFVERLVP 129
Query: 133 HPTYPASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
PT +P ++QVT F CGG+V+G H
Sbjct: 130 DPTREEGMVNP-----CILQVTMFQCGGWVLGASIHH 161
>AT2G23510.1 | chr2:10011517-10013533 REVERSE LENGTH=452
Length = 451
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXX--XXXXXXXXXXXLVSYYP 79
PS P L LS LD P + ++ +VFK + L YYP
Sbjct: 23 PSKHIPQQTLNLSTLDNDPYNEVIYKACYVFKAKNVADDDNRPEALLREALSDLLGYYYP 82
Query: 80 IAGRLAERGDGGELVVDCTGEG--VWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYP 137
++G L + +L + C G+G V F ATA+ L + LE +D D L P
Sbjct: 83 LSGSLKRQESDRKLQLSCGGDGGGVPFTVATANVELSSLKNLEN---IDSDTALNF--LP 137
Query: 138 ASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
+ +QVT+F CGGF++G SH
Sbjct: 138 VLHVDIDGYRPFALQVTKFECGGFILGMAMSH 169
>AT1G24430.1 | chr1:8658190-8659497 REVERSE LENGTH=436
Length = 435
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 77 YYPIAGRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTY 136
YYP+AGR+ GD VV C GV F+EA A C++ + LE P + ++L P
Sbjct: 73 YYPLAGRIKNSGD----VVVCNDVGVSFVEAKADCNMSQI--LENPNPNELNKLHPF--- 123
Query: 137 PASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
E H + L VQ+T F CGG +G SH
Sbjct: 124 ---EFHEVSDVPLTVQLTFFECGGLALGIGLSH 153
>AT1G27620.1 | chr1:9608444-9610432 FORWARD LENGTH=443
Length = 442
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P + TP +L LS LD + R I+ L++F+ LV YYP A
Sbjct: 19 PLSPTPNHSLYLSNLDDHHFLRFSIKYLYLFQK-----SISPLTLKDSLSRVLVDYYPFA 73
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTYPASES 141
GR+ +G +L VDC GEG F EA + +D L +LL +
Sbjct: 74 GRIRVSDEGSKLEVDCNGEGAVFAEAFMDITCQDFVQLSPKPNKSWRKLL----FKVQAQ 129
Query: 142 HPEDSLILLVQVTQFACGGFVVGFRFSH 169
D L++QVT CGG ++ +H
Sbjct: 130 SFLDIPPLVIQVTYLRCGGMILCTAINH 157
>AT5G48930.1 | chr5:19836654-19838092 REVERSE LENGTH=434
Length = 433
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 74 LVSYYPIAGRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPH 133
LV +YP+AGRL +R D G + +DC G GV F+ A ++ D+ ++ ++ +L+P
Sbjct: 64 LVPFYPMAGRL-KRDDDGRIEIDCNGAGVLFVVADTPSVID--DFGDFAPTLNLRQLIPE 120
Query: 134 PTYPAS-ESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
+ A S P +L++QVT F CGG +G H
Sbjct: 121 VDHSAGIHSFP----LLVLQVTFFKCGGASLGVGMQH 153
>AT1G03390.1 | chr1:841033-842418 REVERSE LENGTH=462
Length = 461
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 22 PSAATPGGALPLSWLDRYPTQRALIESLHVFKGRXXXXXXXXXXXXXXXXXXLVSYYPIA 81
P+ +P +L LS LD R S++ + LV YYP++
Sbjct: 32 PANQSPHHSLYLSNLDDIIGARVFTPSVYFYPSTNNRESFVLKRLQDALSEVLVPYYPLS 91
Query: 82 GRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPTY----- 136
GRL E +G V +GV + A +S L D+ D +P+P +
Sbjct: 92 GRLREVENGKLEVFFGEEQGVLMVSANSSMDLADLG----------DLTVPNPAWLPLIF 141
Query: 137 --PASESHPEDSL-ILLVQVTQFACGGFVVGFRFSH 169
P E++ + +L+ QVT F CGGF +G R H
Sbjct: 142 RNPGEEAYKILEMPLLIAQVTFFTCGGFSLGIRLCH 177
>AT2G19070.1 | chr2:8260185-8261958 REVERSE LENGTH=452
Length = 451
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 74 LVSYYPIAGRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPH 133
LV +YP+AGRL G ++C EGV FIEA + L D + ++ + + L+P
Sbjct: 66 LVHFYPMAGRLRWLPRG-RFELNCNAEGVEFIEAESEGKLSD--FKDFSPTPEFENLMPQ 122
Query: 134 PTYPASESHPEDSL-ILLVQVTQFACGGFVVGFRFSH 169
Y +P +++ + L QVT+F CGG + SH
Sbjct: 123 VNY----KNPIETIPLFLAQVTKFKCGGISLSVNVSH 155
>AT1G65450.1 | chr1:24315875-24318895 FORWARD LENGTH=451
Length = 450
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 76 SYYPIAGRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDELLPHPT 135
+Y +AGRL G L VDC G G F+ A + +LE++ L YP +
Sbjct: 82 AYEFLAGRLRVDPSSGRLDVDCNGAGAGFVTAASDYTLEELGDLVYP-----NPAFAQLV 136
Query: 136 YPASESHPEDSLILLV-QVTQFACGGFVVGFRFSH 169
+S P+D L V Q+T F CGGF +G +H
Sbjct: 137 TSQLQSLPKDDQPLFVFQITSFKCGGFAMGISTNH 171
>AT4G15390.1 | chr4:8792941-8794281 REVERSE LENGTH=447
Length = 446
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 74 LVSYYPIAGRLAERGDGGELVVDCTGEGVWFIEA-TASCSLEDVDYLEYPLMVDKDELLP 132
L +YP+AGR+ + VDCT EG F++A +C L ++L+ P +LLP
Sbjct: 72 LTKFYPLAGRITG------VTVDCTDEGAIFVDARVNNCPL--TEFLKCPDFDALQQLLP 123
Query: 133 HPT----YPASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
Y A+ + P +LLV+ T F CGG +G +H
Sbjct: 124 LDVVDNPYVAAATWP----LLLVKATYFGCGGMAIGICITH 160
>AT1G32910.1 | chr1:11925426-11926908 FORWARD LENGTH=465
Length = 464
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 21/100 (21%)
Query: 74 LVSYYPIAGRLAERGDGGELVVDCTGEGVWFIEATASCSLEDVDYLEYPLMVDKDE---- 129
LVSYY AG L + GE + C GV F+EA A L +++ + D DE
Sbjct: 73 LVSYYAFAGELV-KNSSGEPEILCNNRGVDFLEAVADVELRELN------LHDPDESIAK 125
Query: 130 LLPHPTYPASESHPEDSLILLVQVTQFACGGFVVGFRFSH 169
L+P + ++ +QVTQ CG VVG F H
Sbjct: 126 LVPKKKHG----------VIAIQVTQLKCGSIVVGCTFDH 155
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,728,003
Number of extensions: 140773
Number of successful extensions: 417
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 394
Number of HSP's successfully gapped: 21
Length of query: 431
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 330
Effective length of database: 8,337,553
Effective search space: 2751392490
Effective search space used: 2751392490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)