Os06g0581300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1475 family protein.
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Os06g0581300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1475 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.94 | 0.417 | 10.1 | 0.283 | 2.48 | 1.19 | 0.334 | -1.19 | -0.188 | 7.26 | 20.86 | 4411 | -- | -- |
| 80.25 | 0.417 | 10.1 | 0.438 | 2.45 | 1.59 | 0.282 | -- | -0.192 | 7.27 | 19.5 | 10812 | -- | -- |
| 79.01 | 0.414 | 10.1 | 0.313 | 2.48 | 1.16 | -- | -1.29 | -0.175 | 7.25 | 21 | 4411 | -- | -- |
| 78.17 | 0.412 | 10.1 | 0.833 | 2.43 | 1.76 | -- | -- | -0.169 | 7.23 | 18.4 | 21738 | -- | -- |
| 398.07 | 0.929 | 10.1 | 0.39 | -- | 1.2 | -- | -1.34 | -0.107 | -- | 21.1 | 5040 | -- | -- |
| 118.58 | 0.51 | 10.2 | -0.793 | 2.47 | -- | 0.475 | -- | -0.66 | 7.3 | -- | -- | -- | -- |
| 119.18 | 0.511 | 10.2 | -0.783 | 2.47 | -- | -- | -- | -0.661 | 7.29 | -- | -- | -- | -- |
| 397.53 | 0.929 | 10.2 | 1.01 | -- | 1.93 | -- | -- | -0.0337 | -- | 18.72 | 20881 | -- | -- |
| 84.45 | 0.428 | 10.1 | -- | 2.53 | 1.68 | -- | -- | -0.227 | 7.28 | 20.59 | 4417 | -- | -- |
| 441.94 | 0.982 | 10.3 | -0.74 | -- | -- | -- | -- | -0.619 | -- | -- | -- | -- | -- |
| 135.34 | 0.544 | 10.2 | -- | 2.46 | -- | -- | -- | -0.574 | 7.31 | -- | -- | -- | -- |
| 399.93 | 0.931 | 10.2 | -- | -- | 1.38 | -- | -- | -0.208 | -- | 20.82 | 5051 | -- | -- |
| 456.39 | 0.997 | 10.3 | -- | -- | -- | -- | -- | -0.537 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.00 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 8 | 75.54 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 9 | 75.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 13 | 76.43 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 14 | 76.47 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 16 | 76.72 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 22 | 76.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 26 | 76.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 30 | 76.97 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 31 | 77.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 40 | 77.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 42 | 77.08 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 43 | 77.08 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 66 | 77.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 75 | 77.17 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 77 | 77.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 95 | 77.25 | radiation | 20 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 96 | 77.27 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 126 | 77.31 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 134 | 77.34 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 140 | 77.35 | radiation | 30 | 43200 | < th | dose independent | sin | 4 | NA |
| 209 | 77.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 225 | 77.47 | temperature | 20 | 4320 | > th | dose independent | sin | 11 | NA |
| 326 | 77.54 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 346 | 77.55 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 403 | 77.62 | radiation | 30 | 43200 | < th | dose independent | no | NA | NA |
| 404 | 77.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 518 | 77.63 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 570 | 77.67 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 643 | 77.71 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 735 | 77.77 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 738 | 77.77 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 751 | 77.78 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 13 | NA |
| 822 | 77.79 | radiation | 10 | 43200 | < th | dose independent | sin | 21 | NA |