Os06g0575100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0575100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.37 | 0.443 | -1200 | 7350 | 0.146 | -228000 | 0.264 | 1390000 | -0.00922 | 10.4 | 995 | 272 | -- | -- |
| 96.34 | 0.461 | 3.06 | 0.0828 | 0.117 | 0.0127 | 0.284 | -- | -0.0214 | 11.7 | 995 | 272 | -- | -- |
| 7356.69 | 3.99 | -1210 | 7380 | 2.5 | -228000 | -- | 1390000 | 2.35 | 18.1 | 995 | 271 | -- | -- |
| 89.77 | 0.441 | 3.06 | 0.0661 | 0.113 | 1.84 | -- | -- | -0.0148 | 12.2 | 994.7 | 272 | -- | -- |
| 91.89 | 0.446 | -1210 | 7390 | -- | -228000 | -- | 1390000 | -0.0119 | -- | 995 | 272 | -- | -- |
| 96.34 | 0.46 | 3.06 | 0.0829 | 0.117 | -- | 0.285 | -- | -0.0214 | 11.7 | -- | -- | -- | -- |
| 96.62 | 0.46 | 3.06 | 0.0931 | 0.122 | -- | -- | -- | -0.0211 | 10.5 | -- | -- | -- | -- |
| 90.65 | 0.443 | 3.06 | 0.0711 | -- | 1.86 | -- | -- | -0.0141 | -- | 994.6 | 272 | -- | -- |
| 89.55 | 0.441 | 3.06 | -- | 0.116 | 1.9 | -- | -- | -0.0189 | 9.37 | 994.7 | 274 | -- | -- |
| 97.53 | 0.461 | 3.06 | 0.0911 | -- | -- | -- | -- | -0.0216 | -- | -- | -- | -- | -- |
| 96.85 | 0.46 | 3.06 | -- | 0.121 | -- | -- | -- | -0.0315 | 10.4 | -- | -- | -- | -- |
| 90.78 | 0.444 | 3.06 | -- | -- | 1.87 | -- | -- | -0.0208 | -- | 994.7 | 271 | -- | -- |
| 97.75 | 0.461 | 3.07 | -- | -- | -- | -- | -- | -0.0317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.07 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 2 |
| 2 | 82.07 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 2 |
| 30 | 83.71 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 32 | 84.21 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 33 | 84.67 | temperature | 30 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 34 | 84.74 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 17 |
| 44 | 85.35 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 15 |
| 57 | 85.99 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 59 | 86.02 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 74 | 86.18 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 9 | 2 |
| 75 | 86.18 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 8 | 4 |
| 78 | 86.28 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 81 | 86.36 | temperature | 30 | 270 | > th | dose dependent | sin | 10 | NA |
| 87 | 86.59 | wind | 1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 89 | 86.59 | wind | 1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 91 | 86.62 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 10 | 1 |
| 92 | 86.63 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 107 | 86.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 2 |
| 142 | 87.05 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 1 |
| 190 | 87.30 | temperature | 30 | 270 | > th | dose independent | sin | 10 | NA |
| 215 | 87.64 | atmosphere | 995 | 270 | > th | dose independent | sin | 9 | NA |
| 223 | 87.80 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 257 | 88.30 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 287 | 88.60 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 336 | 88.98 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 19 | 18 |
| 407 | 89.38 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 11 |
| 441 | 89.47 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 450 | 89.52 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 488 | 89.62 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 503 | 89.63 | atmosphere | 995 | 270 | > th | dose independent | rect. | 12 | 23 |
| 504 | 89.63 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 514 | 89.66 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 7 | 13 |
| 517 | 89.68 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 539 | 89.75 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 578 | 89.86 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 624 | 89.92 | wind | 9 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 643 | 89.94 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |
| 674 | 89.98 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 702 | 90.02 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 770 | 90.07 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 2 |
| 787 | 90.07 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 794 | 90.09 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 853 | 90.21 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 902 | 90.27 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 935 | 90.28 | atmosphere | 1000 | 270 | < th | dose dependent | sin | 21 | NA |