Os06g0574400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0574400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.84 | 0.308 | 11 | 1.94 | 1.66 | 0.641 | 0.456 | -0.994 | 0.431 | 17.5 | 79.55 | 1331 | -- | -- |
| 43.72 | 0.308 | 11 | 1.86 | 1.66 | 0.597 | 0.401 | -- | 0.415 | 17.5 | 79.97 | 1335 | -- | -- |
| 43.34 | 0.307 | 11 | 1.93 | 1.66 | 0.652 | -- | -0.934 | 0.434 | 17.5 | 79.61 | 1350 | -- | -- |
| 44.11 | 0.309 | 11 | 1.86 | 1.66 | 0.601 | -- | -- | 0.415 | 17.5 | 79.83 | 1350 | -- | -- |
| 159.75 | 0.592 | 11 | 1.76 | -- | -0.588 | -- | -0.11 | 0.329 | -- | 79.61 | 1350 | -- | -- |
| 48.15 | 0.325 | 11.1 | 1.84 | 1.7 | -- | 0.449 | -- | 0.377 | 17.4 | -- | -- | -- | -- |
| 48.65 | 0.327 | 11.1 | 1.84 | 1.7 | -- | -- | -- | 0.379 | 17.4 | -- | -- | -- | -- |
| 159.83 | 0.591 | 11 | 1.76 | -- | -0.588 | -- | -- | 0.328 | -- | 79.61 | 1350 | -- | -- |
| 131.21 | 0.534 | 11 | -- | 1.67 | 0.594 | -- | -- | 0.404 | 17.5 | 83 | 7136 | -- | -- |
| 199.03 | 0.659 | 11 | 1.78 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 137.54 | 0.549 | 11.1 | -- | 1.67 | -- | -- | -- | 0.175 | 17.5 | -- | -- | -- | -- |
| 216.49 | 0.685 | 11.1 | -- | -- | 1.62 | -- | -- | 0.0419 | -- | 64 | 47520 | -- | -- |
| 282.55 | 0.785 | 11.1 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.76 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 2 | 40.15 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 6 | 40.25 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 30 | 40.35 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 34 | 40.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 35 | 40.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 62 | 40.93 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 64 | 40.96 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 76 | 40.97 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 77 | 40.99 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 90 | 41.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 91 | 41.05 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 94 | 41.08 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 96 | 41.11 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 99 | 41.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 101 | 41.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 102 | 41.14 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 103 | 41.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 105 | 41.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 116 | 41.23 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 117 | 41.24 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 129 | 41.31 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 145 | 41.36 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 146 | 41.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 148 | 41.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 150 | 41.37 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 151 | 41.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 153 | 41.37 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 154 | 41.37 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 156 | 41.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 158 | 41.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 161 | 41.40 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 186 | 41.49 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 198 | 41.51 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 202 | 41.51 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 206 | 41.52 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 211 | 41.53 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 6 |
| 212 | 41.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 241 | 41.58 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 251 | 41.62 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 252 | 41.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 253 | 41.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 254 | 41.62 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 263 | 41.64 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 272 | 41.65 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 275 | 41.66 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 314 | 41.70 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 315 | 41.70 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 317 | 41.70 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 337 | 41.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 339 | 41.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 343 | 41.76 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 345 | 41.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 347 | 41.76 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 348 | 41.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 350 | 41.76 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 351 | 41.76 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 356 | 41.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 372 | 41.77 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 376 | 41.78 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 381 | 41.78 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 400 | 41.81 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 402 | 41.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 404 | 41.82 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 439 | 41.86 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 490 | 41.90 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 491 | 41.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 494 | 41.90 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 496 | 41.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 497 | 41.90 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 501 | 41.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 504 | 41.90 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 513 | 41.91 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 517 | 41.92 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 520 | 41.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 539 | 41.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 542 | 41.94 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 546 | 41.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 558 | 41.96 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 576 | 42.00 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 591 | 42.00 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 600 | 42.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 623 | 42.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 645 | 42.08 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 696 | 42.15 | radiation | 1.0 | 30 | > th | dose independent | sin | 9 | NA |
| 697 | 42.15 | radiation | 1.0 | 30 | < th | dose independent | sin | 9 | NA |
| 727 | 42.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 20 |
| 737 | 42.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 749 | 42.19 | humidity | 90.0 | 720 | > th | dose independent | rect. | 12 | 14 |
| 751 | 42.19 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 752 | 42.19 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 767 | 42.20 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 778 | 42.21 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 794 | 42.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 797 | 42.23 | humidity | 80.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 808 | 42.24 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 811 | 42.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 849 | 42.27 | humidity | 90.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 887 | 42.29 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 941 | 42.34 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 947 | 42.35 | humidity | 90.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 959 | 42.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 993 | 42.39 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 4 |