Os06g0571300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0571300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.59 | 0.28 | 9.38 | -0.889 | 0.52 | -0.034 | 0.768 | -1.78 | -0.145 | 2.37 | 19.76 | 976 | -- | -- |
| 38.61 | 0.289 | 9.34 | -0.776 | 0.519 | 0.65 | 0.341 | -- | -0.116 | 2.63 | 15.3 | 3857 | -- | -- |
| 36.71 | 0.282 | 9.39 | -0.942 | 0.531 | 0.0432 | -- | -1.79 | -0.164 | 2.33 | 19.8 | 1577 | -- | -- |
| 38.76 | 0.29 | 9.33 | -0.796 | 0.507 | 0.786 | -- | -- | -0.109 | 2.13 | 16.8 | 3113 | -- | -- |
| 52.98 | 0.339 | 9.38 | -0.914 | -- | 0.103 | -- | -1.65 | -0.163 | -- | 19.7 | 1246 | -- | -- |
| 43.67 | 0.31 | 9.32 | -0.546 | 0.531 | -- | 0.355 | -- | -0.0464 | 2.45 | -- | -- | -- | -- |
| 44.12 | 0.311 | 9.32 | -0.555 | 0.531 | -- | -- | -- | -0.0484 | 2.41 | -- | -- | -- | -- |
| 54.52 | 0.344 | 9.34 | -0.771 | -- | 0.884 | -- | -- | -0.109 | -- | 16.8 | 2652 | -- | -- |
| 51.65 | 0.335 | 9.31 | -- | 0.516 | 0.238 | -- | -- | -0.00058 | 2.37 | 17.04 | 3039 | -- | -- |
| 60.79 | 0.364 | 9.32 | -0.533 | -- | -- | -- | -- | -0.0353 | -- | -- | -- | -- | -- |
| 52.24 | 0.338 | 9.31 | -- | 0.521 | -- | -- | -- | 0.0134 | 2.4 | -- | -- | -- | -- |
| 65.95 | 0.378 | 9.31 | -- | -- | 0.957 | -- | -- | 0.012 | -- | 14.5 | 1467 | -- | -- |
| 68.28 | 0.386 | 9.31 | -- | -- | -- | -- | -- | 0.0238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.67 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 19 |
| 6 | 34.91 | temperature | 20 | 1440 | < th | dose dependent | rect. | 14 | 8 |
| 19 | 35.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 11 |
| 20 | 35.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 11 |
| 25 | 35.11 | temperature | 20 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 28 | 35.13 | temperature | 20 | 720 | < th | dose independent | sin | 18 | NA |
| 30 | 35.14 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 53 | 35.23 | temperature | 20 | 1440 | < th | dose dependent | sin | 18 | NA |
| 96 | 35.35 | temperature | 20 | 1440 | > th | dose independent | sin | 19 | NA |
| 155 | 35.45 | temperature | 15 | 4320 | < th | dose dependent | rect. | 1 | 18 |
| 250 | 35.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 276 | 35.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 281 | 35.61 | temperature | 15 | 4320 | < th | dose dependent | sin | 2 | NA |
| 462 | 35.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 491 | 35.81 | temperature | 20 | 270 | < th | dose dependent | sin | 13 | NA |
| 509 | 35.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 583 | 35.87 | temperature | 15 | 4320 | < th | dose dependent | rect. | 24 | 12 |
| 770 | 35.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |