Os06g0561200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium/proton antiporter-like protein.
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Os06g0561200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Potassium/proton antiporter-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.32 | 0.232 | 10.4 | -0.53 | 1.06 | 0.488 | -0.397 | 0.0781 | 0.011 | 23.1 | 0.1656 | 6690 | -- | -- |
| 24.32 | 0.23 | 10.4 | -0.523 | 1.07 | 0.495 | -0.394 | -- | 0.0106 | 23.1 | 0.1502 | 6690 | -- | -- |
| 24.99 | 0.233 | 10.4 | -0.522 | 1.06 | 0.485 | -- | 0.0884 | 0.0104 | 23.2 | 0.1667 | 6730 | -- | -- |
| 24.99 | 0.233 | 10.4 | -0.514 | 1.07 | 0.494 | -- | -- | 0.0149 | 23.1 | 0.166 | 6730 | -- | -- |
| 95.59 | 0.455 | 10.4 | -0.517 | -- | 0.481 | -- | 0.107 | 0.00677 | -- | 0.2528 | 6510 | -- | -- |
| 30.54 | 0.259 | 10.4 | -0.417 | 1.06 | -- | -0.373 | -- | -0.0613 | 23.1 | -- | -- | -- | -- |
| 31.13 | 0.261 | 10.4 | -0.402 | 1.07 | -- | -- | -- | -0.0601 | 23.1 | -- | -- | -- | -- |
| 95.57 | 0.455 | 10.4 | -0.498 | -- | 0.503 | -- | -- | 0.00688 | -- | 0.2774 | 6510 | -- | -- |
| 30.74 | 0.258 | 10.4 | -- | 1.08 | 0.387 | -- | -- | 0.0854 | 23.3 | 0.161 | 16902 | -- | -- |
| 101.99 | 0.472 | 10.4 | -0.377 | -- | -- | -- | -- | -0.0511 | -- | -- | -- | -- | -- |
| 35.39 | 0.278 | 10.4 | -- | 1.06 | -- | -- | -- | -0.0153 | 23.1 | -- | -- | -- | -- |
| 101.43 | 0.469 | 10.4 | -- | -- | 0.388 | -- | -- | 0.093 | -- | -0.03857 | 16238 | -- | -- |
| 105.73 | 0.48 | 10.4 | -- | -- | -- | -- | -- | -0.00929 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 2 | 24.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 3 | 24.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 4 | 24.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 6 | 24.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 9 | 24.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 10 | 24.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 16 | 24.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 27 | 24.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 41 | 24.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 53 | 25.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 67 | 25.04 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 23 | NA |
| 70 | 25.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 73 | 25.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 76 | 25.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 126 | 25.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 156 | 25.17 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 243 | 25.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 254 | 25.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 256 | 25.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 262 | 25.24 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 281 | 25.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 282 | 25.25 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 20 | NA |
| 283 | 25.25 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 20 | NA |
| 286 | 25.25 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 20 | NA |
| 329 | 25.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 13 |
| 336 | 25.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 13 |
| 347 | 25.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 348 | 25.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 366 | 25.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 20 |
| 382 | 25.30 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 20 |
| 396 | 25.30 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 20 |
| 398 | 25.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 455 | 25.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 474 | 25.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 11 |
| 475 | 25.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 484 | 25.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 486 | 25.35 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 488 | 25.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 11 |
| 537 | 25.38 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 545 | 25.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 571 | 25.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 581 | 25.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 7 |
| 678 | 25.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 687 | 25.46 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 688 | 25.46 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 691 | 25.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 700 | 25.46 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 759 | 25.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 900 | 25.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |