Os06g0561000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myo-inositol oxygenase.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0561000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Myo-inositol oxygenase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 801.27 | 1.33 | 6.39 | -5.02 | 2.78 | 2.03 | -4.13 | -3.98 | -1.26 | 13.8 | 20.59 | 683 | 3.98 | -- |
| 832.56 | 1.34 | 6.31 | -4.35 | 2.56 | 1.99 | -4.19 | -- | -1.13 | 13.4 | 20.6 | 818 | 4.29 | -- |
| 840.36 | 1.35 | 6.43 | -5.79 | 1.94 | 2.3 | -- | -6.41 | -1.5 | 13.9 | 20.5 | 537 | 1.1 | -- |
| 890.35 | 1.39 | 6.32 | -4.36 | 3.54 | 2.1 | -- | -- | -1.12 | 13.7 | 20.42 | 603 | 5.61 | -- |
| 924.99 | 1.42 | 6.45 | -5.59 | -- | 3.5 | -- | -6.99 | -1.39 | -- | 19.1 | 623 | 0.000127 | -- |
| 932.99 | 1.43 | 6.19 | -3.76 | 2.85 | -- | -3.76 | -- | -0.695 | 12.1 | -- | -- | -- | -- |
| 994.29 | 1.48 | 6.2 | -3.9 | 2.86 | -- | -- | -- | -0.712 | 12.1 | -- | -- | -- | -- |
| 967.18 | 1.45 | 6.36 | -4.74 | -- | 3.62 | -- | -- | -1.18 | -- | 19.33 | 647 | 4.77e-08 | -- |
| 1369.96 | 1.72 | 6.14 | -- | 3.37 | 1.16 | -- | -- | -0.439 | 13.1 | 20.59 | 594 | 6.08 | -- |
| 1509.2 | 1.82 | 6.26 | -3.99 | -- | -- | -- | -- | -0.753 | -- | -- | -- | -- | -- |
| 1396.04 | 1.75 | 6.1 | -- | 2.91 | -- | -- | -- | -0.278 | 12.1 | -- | -- | -- | -- |
| 1396.04 | 1.74 | 6.15 | -- | -- | 2.91 | -- | -- | -0.278 | -- | 13.86 | 782 | 0.37 | -- |
| 1930.1 | 2.05 | 6.16 | -- | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 774.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 7 | 777.98 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 11 | 780.74 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 13 | 781.32 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 23 | 782.83 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 24 | 782.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 30 | 783.79 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 32 | 783.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 37 | 784.35 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 41 | 784.57 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 58 | 785.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 62 | 785.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 79 | 786.52 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 94 | 787.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 96 | 787.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 119 | 787.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 120 | 787.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 124 | 788.03 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 134 | 788.56 | humidity | 90.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 138 | 788.75 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 142 | 788.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 148 | 788.96 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 11 |
| 157 | 789.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 176 | 789.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 187 | 789.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 188 | 789.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 198 | 789.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 208 | 790.05 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 217 | 790.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 229 | 790.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 231 | 790.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 233 | 790.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 237 | 790.57 | humidity | 90.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 239 | 790.62 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 242 | 790.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 248 | 790.77 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 251 | 790.83 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 263 | 790.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 273 | 791.13 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 306 | 791.72 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 325 | 792.08 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 386 | 792.70 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 392 | 792.76 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 431 | 793.38 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 433 | 793.39 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 446 | 793.39 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 457 | 793.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 458 | 793.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 511 | 793.89 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 517 | 793.97 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 674 | 795.24 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 689 | 795.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 696 | 795.44 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 700 | 795.46 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 740 | 795.69 | radiation | 1.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 751 | 795.73 | radiation | 1.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 789 | 795.91 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 790 | 795.91 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 938 | 796.55 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 11 |