Os06g0557200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0557200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.8 | 0.684 | 3.11 | 0.0164 | 4.47 | -4.13 | -14.9 | 14.8 | -0.155 | 1.29 | 28.86 | 12 | 4.89 | -- |
| 227.45 | 0.708 | 3.11 | 0.117 | 4 | -3.68 | 0.336 | -- | -0.167 | 1.27 | 28.86 | 12 | 4.89 | -- |
| 226.63 | 0.707 | 3.11 | 0.12 | 3.98 | -3.66 | -- | 0.541 | -0.165 | 1.27 | 28.86 | 12 | 4.89 | -- |
| 224.69 | 0.698 | 3.07 | 0.0985 | 4.23 | -3.89 | -- | -- | -0.129 | 1.45 | 29.66 | 9 | 4.73 | -- |
| 237.15 | 0.717 | 3.07 | 0.0943 | -- | 0.33 | -- | 0.0847 | -0.192 | -- | 103.8 | 10 | 2.19 | -- |
| 237.15 | 0.722 | 3.07 | 0.0934 | 0.33 | -- | 0.0855 | -- | -0.192 | 3.89 | -- | -- | -- | -- |
| 237.16 | 0.721 | 3.07 | 0.0923 | 0.332 | -- | -- | -- | -0.192 | 3.98 | -- | -- | -- | -- |
| 237.16 | 0.717 | 3.07 | 0.0923 | -- | 0.332 | -- | -- | -0.192 | -- | 107.1 | 16 | 2.15 | -- |
| 224.6 | 0.698 | 3.08 | -- | 4.32 | -3.95 | -- | -- | -0.0968 | 1.58 | 29.65 | 9 | 4.56 | -- |
| 243.17 | 0.729 | 3.07 | 0.106 | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
| 237.39 | 0.721 | 3.07 | -- | 0.333 | -- | -- | -- | -0.203 | 3.98 | -- | -- | -- | -- |
| 237.39 | 0.718 | 3.07 | -- | -- | 0.333 | -- | -- | -0.203 | -- | 113.7 | 15 | 2.15 | -- |
| 243.47 | 0.728 | 3.07 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.87 | humidity | 70 | 30 | < th | dose dependent | rect. | 17 | 16 |
| 9 | 203.03 | humidity | 80 | 90 | < th | dose independent | rect. | 24 | 8 |
| 12 | 203.58 | humidity | 70 | 10 | < th | dose independent | rect. | 16 | 17 |
| 26 | 205.41 | humidity | 80 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 28 | 205.50 | radiation | 20 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 31 | 205.63 | humidity | 80 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 58 | 206.24 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 179 | 206.39 | radiation | 30 | 90 | > th | dose independent | rect. | 7 | 1 |
| 199 | 206.57 | radiation | 30 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 775 | 212.20 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 782 | 212.83 | radiation | 30 | 10 | < th | dose independent | sin | 11 | NA |
| 806 | 213.23 | radiation | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 847 | 214.85 | humidity | 70 | 10 | < th | dose independent | sin | 11 | NA |
| 881 | 216.09 | humidity | 80 | 720 | < th | dose independent | rect. | 23 | 9 |
| 914 | 216.93 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 2 |
| 922 | 217.16 | radiation | 10 | 10 | > th | dose dependent | sin | 11 | NA |
| 935 | 217.64 | humidity | 70 | 10 | > th | dose independent | sin | 10 | NA |
| 972 | 218.01 | humidity | 80 | 10 | < th | dose dependent | sin | 11 | NA |
| 995 | 218.77 | humidity | 80 | 720 | < th | dose dependent | rect. | 7 | 1 |