Os06g0528300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0528300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 416.09 | 0.958 | 3.36 | -0.402 | 0.628 | 0.665 | 0.912 | 11.1 | -0.214 | 10.5 | 0.1574 | 10 | -- | -- |
| 418.24 | 0.96 | 3.37 | -0.388 | 0.607 | 3.86 | 0.767 | -- | -0.216 | 10.7 | 0.1574 | 10 | -- | -- |
| 419.35 | 0.954 | 3.36 | -0.361 | 0.619 | 1.04 | -- | 9.81 | -0.214 | 10.6 | 0.3066 | 9 | -- | -- |
| 419.71 | 0.954 | 3.37 | -0.378 | 0.617 | 3.85 | -- | -- | -0.208 | 10.7 | 0.3 | 9 | -- | -- |
| 442.63 | 0.98 | 3.37 | -0.348 | -- | 0.125 | -- | 12.5 | -0.217 | -- | 0.4152 | 9 | -- | -- |
| 432.95 | 0.975 | 3.37 | -0.351 | 0.604 | -- | 0.759 | -- | -0.223 | 10.4 | -- | -- | -- | -- |
| 435.27 | 0.977 | 3.37 | -0.32 | 0.599 | -- | -- | -- | -0.221 | 10.5 | -- | -- | -- | -- |
| 442.91 | 0.98 | 3.38 | -0.378 | -- | 3.78 | -- | -- | -0.214 | -- | 0.437 | 9 | -- | -- |
| 423.43 | 0.958 | 3.36 | -- | 0.617 | 3.8 | -- | -- | -0.168 | 10.7 | 0.3618 | 9 | -- | -- |
| 457.27 | 0.999 | 3.39 | -0.33 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
| 437.96 | 0.979 | 3.36 | -- | 0.601 | -- | -- | -- | -0.185 | 10.6 | -- | -- | -- | -- |
| 446.68 | 0.988 | 3.37 | -- | -- | 3.67 | -- | -- | -0.176 | -- | 0.3618 | 9 | -- | -- |
| 460.14 | 1 | 3.38 | -- | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 413.44 | humidity | 60.0 | 10 | < th | dose independent | sin | 9 | NA |
| 2 | 413.86 | humidity | 60.0 | 10 | > th | dose independent | sin | 9 | NA |
| 3 | 414.30 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 22 | 7 |
| 4 | 414.59 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 5 | 414.69 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 13 | 414.82 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 22 | 7 |
| 18 | 414.95 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 22 | 13 |
| 25 | 415.11 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 18 | 19 |
| 33 | 415.29 | humidity | 60.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 72 | 415.85 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 23 |
| 73 | 415.85 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 88 | 416.03 | temperature | 30.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 98 | 416.11 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 102 | 416.20 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 143 | 416.25 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 156 | 416.32 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 11 | NA |
| 157 | 416.34 | precipitation | 0.1 | 10 | < th | dose independent | sin | 10 | NA |
| 158 | 416.34 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 10 | NA |
| 159 | 416.35 | precipitation | 0.1 | 30 | > th | dose independent | sin | 7 | NA |
| 162 | 416.36 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 164 | 416.36 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 186 | 416.48 | precipitation | 0.1 | 10 | > th | dose independent | sin | 10 | NA |
| 192 | 416.54 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 19 | 23 |
| 197 | 416.54 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 198 | 416.55 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 254 | 416.55 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 259 | 416.57 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 10 |
| 293 | 416.76 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 7 | NA |
| 315 | 416.78 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 22 |
| 342 | 416.87 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 21 |
| 368 | 416.89 | precipitation | 0.1 | 30 | < th | dose independent | sin | 7 | NA |
| 369 | 416.89 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 7 | NA |
| 385 | 416.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 462 | 417.27 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 463 | 417.27 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 512 | 417.27 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 23 |
| 514 | 417.27 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 515 | 417.27 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 597 | 417.51 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 598 | 417.51 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 602 | 417.51 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 603 | 417.51 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 607 | 417.52 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 3 |
| 628 | 417.59 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 9 |
| 632 | 417.64 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 635 | 417.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 7 |
| 694 | 417.83 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 724 | 417.99 | wind | 3.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 749 | 418.05 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 750 | 418.06 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 19 |
| 767 | 418.11 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 769 | 418.11 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 773 | 418.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 777 | 418.13 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 800 | 418.21 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 9 |
| 863 | 418.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 23 |
| 865 | 418.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 866 | 418.39 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 891 | 418.46 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 916 | 418.52 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 921 | 418.54 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 980 | 418.65 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 20 |
| 989 | 418.68 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |