Os06g0510200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0510200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.02 | 0.332 | 10.9 | 0.414 | 1.45 | 0.234 | -0.777 | 2.03 | -0.246 | 22.4 | 67.91 | 2585 | -- | -- |
| 54.28 | 0.343 | 10.9 | 0.418 | 1.45 | 0.575 | -0.516 | -- | -0.333 | 22.4 | 67 | 8267 | -- | -- |
| 50.08 | 0.33 | 11 | 0.498 | 1.5 | 0.483 | -- | 1.91 | -0.314 | 22.5 | 68 | 7507 | -- | -- |
| 55.22 | 0.346 | 10.9 | 0.422 | 1.46 | 0.564 | -- | -- | -0.341 | 22.5 | 67.48 | 8258 | -- | -- |
| 137.79 | 0.547 | 10.9 | 0.62 | -- | 1.52 | -- | 1.22 | -0.194 | -- | 78 | 890 | -- | -- |
| 60.04 | 0.363 | 10.9 | 0.298 | 1.5 | -- | -0.495 | -- | -0.286 | 22.5 | -- | -- | -- | -- |
| 61.04 | 0.366 | 10.9 | 0.318 | 1.51 | -- | -- | -- | -0.285 | 22.5 | -- | -- | -- | -- |
| 135.7 | 0.543 | 10.9 | 0.549 | -- | 1.55 | -- | -- | -0.248 | -- | 78.96 | 877 | -- | -- |
| 59.3 | 0.359 | 11 | -- | 1.49 | 0.507 | -- | -- | -0.398 | 22.6 | 68 | 7658 | -- | -- |
| 200.16 | 0.661 | 10.9 | 0.344 | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
| 63.7 | 0.373 | 10.9 | -- | 1.51 | -- | -- | -- | -0.32 | 22.5 | -- | -- | -- | -- |
| 134.45 | 0.54 | 10.9 | -- | -- | 1.53 | -- | -- | -0.346 | -- | 79 | 887 | -- | -- |
| 203.28 | 0.665 | 10.9 | -- | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.90 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 47.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 3 | 47.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 4 | 47.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 8 | 47.41 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 9 | 47.41 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 10 | 47.41 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 14 | 47.51 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 22 | 47.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 30 | 47.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 17 |
| 31 | 47.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 34 | 47.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 35 | 47.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 36 | 47.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 17 |
| 41 | 47.75 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 46 | 47.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 47 | 47.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 50 | 47.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 73 | 47.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 74 | 47.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 94 | 48.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 97 | 48.06 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 113 | 48.12 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 115 | 48.14 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 130 | 48.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 139 | 48.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 140 | 48.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 171 | 48.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 173 | 48.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 205 | 48.40 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 247 | 48.49 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 248 | 48.49 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 261 | 48.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 263 | 48.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 264 | 48.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 275 | 48.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 283 | 48.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 300 | 48.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 303 | 48.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 306 | 48.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 309 | 48.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 310 | 48.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 314 | 48.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 318 | 48.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 347 | 48.72 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 348 | 48.72 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 353 | 48.72 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 378 | 48.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 384 | 48.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 387 | 48.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 390 | 48.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 396 | 48.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 400 | 48.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 401 | 48.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 405 | 48.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 409 | 48.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 414 | 48.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 425 | 48.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 426 | 48.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 429 | 48.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 435 | 48.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 438 | 48.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 448 | 48.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 468 | 48.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 477 | 48.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 551 | 48.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 600 | 48.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 651 | 48.99 | humidity | 90.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 652 | 48.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 660 | 48.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 752 | 49.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 833 | 49.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 868 | 49.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 880 | 49.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 894 | 49.20 | wind | 9.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 925 | 49.23 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 928 | 49.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 933 | 49.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 950 | 49.25 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 966 | 49.27 | wind | 9.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 991 | 49.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 994 | 49.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 996 | 49.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |