Os06g0507200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os06g0507200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.49 | 0.548 | 2.71 | 0.0714 | 0.0637 | 11 | -0.181 | -25.8 | 0.021 | 18.3 | 0.1 | 90 | 7 | 1 |
| 146.04 | 0.563 | 2.74 | 0.13 | 0.0448 | 5.38 | -0.378 | -- | 0.0615 | 3.54 | 0.007215 | 70 | 6.32 | 1.18 |
| 138.54 | 0.548 | 2.71 | 0.0745 | 0.0671 | 10.9 | -- | -25.6 | 0.0207 | 17 | 0.1125 | 87 | 6.98 | 2.2 |
| 138.72 | 0.549 | 2.7 | 0.135 | 0.0533 | 3.82 | -- | -- | 0.0194 | 14.9 | 0.2672 | 54 | 6.48 | 1.01 |
| 138.78 | 0.549 | 2.71 | 0.0724 | -- | 10.9 | -- | -25.4 | 0.0188 | -- | 0.1145 | 86 | 6.97 | 2.84 |
| 167.34 | 0.606 | 2.7 | 0.134 | 0.0427 | -- | 0.197 | -- | -0.00289 | 10.4 | -- | -- | -- | -- |
| 167.47 | 0.606 | 2.7 | 0.143 | 0.046 | -- | -- | -- | -0.00178 | 12.3 | -- | -- | -- | -- |
| 138.89 | 0.549 | 2.7 | 0.137 | -- | 3.8 | -- | -- | 0.0184 | -- | 0.2664 | 55 | 6.51 | 1.04 |
| 139.16 | 0.549 | 2.7 | -- | 0.0648 | 3.82 | -- | -- | 0.00467 | 17.1 | 0.2414 | 53 | 6.87 | 0.755 |
| 167.61 | 0.605 | 2.7 | 0.141 | -- | -- | -- | -- | -0.00251 | -- | -- | -- | -- | -- |
| 168.01 | 0.606 | 2.71 | -- | 0.0441 | -- | -- | -- | -0.0177 | 12.1 | -- | -- | -- | -- |
| 139.38 | 0.55 | 2.7 | -- | -- | 3.8 | -- | -- | 0.00317 | -- | 0.2686 | 52 | 6.57 | 1.04 |
| 168.13 | 0.605 | 2.71 | -- | -- | -- | -- | -- | -0.0182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.49 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 7 | 138.49 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 13 | 141.36 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 19 | 146.11 | radiation | 1.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 43 | 147.79 | wind | 3.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 63 | 149.76 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 66 | 150.49 | wind | 3.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 71 | 150.86 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 2 |
| 140 | 151.97 | wind | 3.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 149 | 152.17 | wind | 3.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 156 | 152.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 4 |
| 166 | 152.66 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 4 |
| 200 | 153.51 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 13 |
| 204 | 153.51 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 229 | 153.99 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 2 |
| 242 | 154.29 | wind | 1.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 279 | 154.86 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 301 | 154.86 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 326 | 154.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 363 | 154.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 409 | 155.13 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 11 |
| 415 | 155.21 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 425 | 155.21 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 435 | 155.22 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 14 |
| 439 | 155.23 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 475 | 155.52 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 1 |
| 493 | 155.64 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 2 |
| 499 | 155.69 | wind | 1.0 | 30 | < th | dose dependent | rect. | 13 | 1 |
| 508 | 155.75 | wind | 1.0 | 30 | < th | dose dependent | rect. | 13 | 5 |
| 623 | 155.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 15 |
| 626 | 155.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 651 | 156.06 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 729 | 156.42 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 840 | 156.83 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 15 |
| 845 | 156.86 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 855 | 156.89 | precipitation | 0.1 | 720 | < th | dose independent | sin | 7 | NA |
| 857 | 156.89 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 7 | NA |
| 858 | 156.90 | precipitation | 0.1 | 720 | > th | dose independent | sin | 7 | NA |
| 883 | 157.16 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 884 | 157.16 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 967 | 157.62 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 969 | 157.65 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 973 | 157.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |