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Os06g0498500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nucleolar complex-associated family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0219) R2 : 0.609
β1 : 1.16 (0.0801) R2dD : 0.187 R2D : 0.159
β2 : 1.26 (0.0556) R2dC : 0.445 R2C : 0.426
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.133 (0.0467) R2dN8 : 0.00939 R2N8 : -0.0101
σ : 0.411
deviance : 77.19
__
_____
C
peak time of C : 15.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.89 0.378 9.83 0.305 1.2 0.232 0.162 -6.28 0.0472 16.1 31.95 1150 -- --
69.29 0.388 9.71 1.25 1.23 -0.389 0.137 -- 0.0687 16 32.8 5490 -- --
64.95 0.375 9.83 0.29 1.2 0.243 -- -6.4 0.0483 16.1 31.87 1140 -- --
66.15 0.379 9.71 1.25 1.2 -0.479 -- -- 0.0544 16.1 33.17 1093 -- --
142.18 0.555 9.83 0.326 -- 0.0487 -- -6.1 -0.0151 -- 31.6 1160 -- --
76.94 0.411 9.69 1.16 1.26 -- 0.295 -- 0.132 15.9 -- -- -- --
77.19 0.411 9.69 1.16 1.26 -- -- -- 0.133 15.9 -- -- -- --
144.67 0.56 9.71 1.27 -- -0.638 -- -- -0.0121 -- 31.98 1160 -- --
107.1 0.482 9.73 -- 1.21 -0.492 -- -- -0.055 16.1 34.76 1139 -- --
164.79 0.6 9.69 1.11 -- -- -- -- 0.0997 -- -- -- -- --
112.73 0.497 9.72 -- 1.24 -- -- -- 0.00413 15.9 -- -- -- --
185.13 0.634 9.73 -- -- -0.57 -- -- -0.106 -- 34.3 1106 -- --
197.25 0.656 9.72 -- -- -- -- -- -0.0234 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.21 wind 5.0 90 < th dose independent rect. 3 5
2 55.48 wind 5.0 270 < th dose independent rect. 3 2
3 55.57 wind 9.0 90 < th dose dependent rect. 3 5
5 55.95 precipitation 0.1 90 < th dose independent rect. 3 5
6 55.95 precipitation 0.1 90 < th dose dependent rect. 3 5
7 56.01 precipitation 0.1 270 < th dose independent rect. 3 2
8 56.01 precipitation 0.1 270 < th dose dependent rect. 3 2
10 56.32 wind 9.0 90 < th dose independent rect. 8 19
12 56.44 wind 9.0 270 < th dose independent rect. 5 22
13 56.45 wind 9.0 270 < th dose dependent rect. 3 2
16 56.48 temperature 10.0 90 > th dose independent rect. 3 5
18 56.48 temperature 30.0 90 < th dose independent rect. 3 5
19 56.48 humidity 50.0 90 > th dose independent rect. 3 5
21 56.48 atmosphere 995.0 90 > th dose independent rect. 3 5
22 56.48 atmosphere 1015.0 90 < th dose independent rect. 3 5
23 56.48 temperature 10.0 90 > th dose independent rect. 8 19
25 56.56 radiation 40.0 90 < th dose independent rect. 3 5
26 56.57 temperature 10.0 90 > th dose dependent rect. 3 5
27 56.61 wind 5.0 270 < th dose independent rect. 1 5
28 56.66 wind 7.0 10 < th dose dependent rect. 3 6
31 56.85 radiation 1.0 270 < th dose dependent rect. 3 2
33 56.92 temperature 10.0 270 > th dose independent rect. 3 2
35 56.92 temperature 30.0 270 < th dose independent rect. 3 2
36 56.92 humidity 50.0 270 > th dose independent rect. 3 2
39 56.92 atmosphere 995.0 270 > th dose independent rect. 3 2
40 56.92 atmosphere 1010.0 270 < th dose independent rect. 3 2
42 56.92 radiation 20.0 270 < th dose independent rect. 3 2
45 56.92 temperature 10.0 270 > th dose independent rect. 5 22
48 56.94 radiation 30.0 270 < th dose dependent rect. 3 2
52 57.00 radiation 1.0 270 < th dose independent rect. 3 2
55 57.02 precipitation 0.1 90 < th dose independent rect. 8 19
56 57.02 precipitation 0.1 90 < th dose dependent rect. 8 19
60 57.18 temperature 10.0 270 > th dose dependent rect. 3 2
63 57.35 atmosphere 995.0 90 > th dose independent rect. 8 19
66 57.46 wind 5.0 10 < th dose independent rect. 3 6
72 57.61 precipitation 0.1 10 < th dose independent rect. 3 6
74 57.61 precipitation 0.1 10 < th dose dependent rect. 3 6
83 57.71 humidity 50.0 270 > th dose dependent rect. 3 2
88 57.83 wind 1.0 270 > th dose independent rect. 3 1
94 57.95 precipitation 0.1 270 < th dose independent rect. 1 5
95 57.95 precipitation 0.1 270 < th dose dependent rect. 1 5
103 58.05 temperature 15.0 270 > th dose independent rect. 13 17
111 58.17 wind 9.0 270 < th dose independent rect. 6 19
120 58.25 temperature 10.0 10 > th dose dependent rect. 3 5
142 58.35 wind 9.0 10 < th dose independent rect. 9 18
143 58.37 temperature 15.0 90 > th dose independent rect. 15 17
153 58.42 radiation 40.0 90 < th dose dependent rect. 3 6
158 58.50 atmosphere 1010.0 270 < th dose independent rect. 1 5
160 58.50 temperature 10.0 10 > th dose independent rect. 3 6
162 58.50 temperature 30.0 10 < th dose independent rect. 3 6
163 58.50 humidity 50.0 10 > th dose independent rect. 3 6
165 58.50 atmosphere 995.0 10 > th dose independent rect. 3 6
166 58.50 atmosphere 1015.0 10 < th dose independent rect. 3 6
168 58.50 temperature 10.0 10 > th dose independent rect. 9 18
174 58.55 temperature 10.0 270 > th dose independent rect. 1 5
176 58.55 temperature 30.0 270 < th dose independent rect. 1 5
177 58.55 humidity 50.0 270 > th dose independent rect. 1 5
180 58.55 atmosphere 995.0 270 > th dose independent rect. 1 5
182 58.55 radiation 20.0 270 < th dose independent rect. 1 5
186 58.55 temperature 10.0 270 > th dose independent rect. 6 19
197 58.61 humidity 50.0 90 > th dose dependent rect. 3 5
199 58.62 radiation 20.0 270 < th dose dependent rect. 1 6
205 58.66 precipitation 0.1 10 < th dose independent rect. 9 18
208 58.66 precipitation 0.1 10 < th dose dependent rect. 9 18
286 58.94 radiation 40.0 10 < th dose independent rect. 3 6
325 59.10 precipitation 0.1 270 < th dose independent rect. 5 22
328 59.10 precipitation 0.1 270 < th dose dependent rect. 5 22
329 59.11 precipitation 0.1 270 < th dose independent rect. 13 17
330 59.11 precipitation 0.1 270 < th dose dependent rect. 13 17
334 59.18 atmosphere 995.0 10 > th dose independent rect. 9 18
343 59.29 precipitation 0.1 270 < th dose independent rect. 6 19
345 59.29 precipitation 0.1 270 < th dose dependent rect. 6 19
358 59.39 humidity 50.0 90 > th dose independent rect. 8 19
359 59.39 atmosphere 995.0 270 > th dose independent rect. 6 19
362 59.42 temperature 15.0 270 > th dose independent rect. 11 10
366 59.43 wind 9.0 90 < th dose dependent rect. 8 19
370 59.45 wind 9.0 270 < th dose independent rect. 6 7
377 59.47 temperature 15.0 10 > th dose independent rect. 15 17
379 59.49 precipitation 0.1 270 < th dose independent rect. 2 15
383 59.49 precipitation 0.1 270 < th dose dependent rect. 2 15
396 59.52 temperature 10.0 270 > th dose independent rect. 6 7
397 59.52 atmosphere 995.0 270 > th dose independent rect. 6 7
398 59.52 atmosphere 1015.0 270 < th dose independent rect. 6 7
401 59.53 humidity 50.0 270 > th dose independent rect. 6 7
402 59.53 precipitation 0.1 270 < th dose independent rect. 6 7
404 59.53 precipitation 0.1 270 < th dose dependent rect. 6 7
423 59.58 atmosphere 1015.0 270 < th dose dependent rect. 3 2
444 59.69 atmosphere 1005.0 90 > th dose independent rect. 3 5
461 59.74 atmosphere 995.0 270 > th dose independent rect. 5 21
465 59.78 humidity 50.0 270 > th dose dependent rect. 1 5
470 59.80 precipitation 0.1 90 < th dose independent rect. 8 7
472 59.80 precipitation 0.1 90 < th dose dependent rect. 8 7
473 59.81 wind 1.0 270 > th dose independent rect. 2 3
476 59.82 atmosphere 995.0 90 > th dose dependent rect. 3 5
483 59.86 humidity 50.0 90 > th dose dependent rect. 19 8
495 59.92 temperature 10.0 90 > th dose independent rect. 8 7
496 59.92 atmosphere 1015.0 90 < th dose independent rect. 8 7
501 59.94 temperature 15.0 270 > th dose independent rect. 2 15
503 59.95 atmosphere 995.0 90 > th dose independent rect. 8 7
507 59.96 radiation 40.0 90 < th dose independent rect. 13 19
508 59.96 temperature 15.0 270 > th dose independent rect. 11 20
511 59.98 atmosphere 1005.0 270 > th dose independent rect. 3 2
524 59.99 wind 9.0 270 < th dose independent rect. 13 17
525 59.99 atmosphere 1015.0 90 < th dose independent rect. 15 17
528 60.00 wind 9.0 270 < th dose independent rect. 17 9
538 60.02 atmosphere 995.0 270 > th dose independent rect. 17 9
544 60.05 atmosphere 1015.0 270 < th dose independent rect. 13 17
562 60.08 radiation 40.0 270 < th dose dependent rect. 17 9
582 60.12 wind 9.0 90 < th dose independent rect. 8 7
589 60.14 temperature 10.0 270 > th dose independent rect. 17 9
590 60.14 radiation 20.0 270 < th dose independent rect. 17 9
594 60.14 atmosphere 1015.0 270 < th dose independent rect. 2 15
596 60.14 radiation 40.0 90 < th dose independent rect. 15 17
602 60.16 atmosphere 1015.0 90 < th dose dependent rect. 3 5
669 60.31 wind 9.0 90 < th dose independent rect. 15 17
685 60.36 wind 9.0 270 < th dose dependent rect. 6 19
689 60.38 wind 9.0 270 < th dose dependent rect. 6 7
708 60.41 wind 1.0 270 > th dose independent rect. 1 5
710 60.41 wind 1.0 90 > th dose independent rect. 8 7
715 60.42 humidity 50.0 270 > th dose independent rect. 20 15
722 60.44 atmosphere 1015.0 270 < th dose independent rect. 11 10
739 60.47 humidity 50.0 270 > th dose independent rect. 17 9
741 60.47 temperature 10.0 270 > th dose independent rect. 20 15
742 60.47 atmosphere 995.0 270 > th dose independent rect. 20 15
750 60.49 atmosphere 1000.0 90 > th dose independent rect. 20 7
751 60.49 radiation 1.0 90 > th dose independent rect. 8 7
754 60.50 atmosphere 995.0 270 > th dose dependent rect. 3 2
763 60.54 wind 9.0 270 < th dose independent rect. 20 15
792 60.56 precipitation 0.1 270 < th dose independent rect. 11 9
802 60.56 precipitation 0.1 270 < th dose dependent rect. 11 9
821 60.58 radiation 40.0 90 < th dose dependent rect. 3 8
828 60.60 humidity 50.0 90 > th dose independent rect. 8 7
834 60.62 temperature 10.0 1440 > th dose independent rect. 3 7
837 60.62 atmosphere 995.0 1440 > th dose independent rect. 3 7
838 60.62 temperature 10.0 1440 > th dose independent rect. 10 17
856 60.64 precipitation 0.1 10 < th dose independent rect. 15 17
859 60.64 precipitation 0.1 10 < th dose dependent rect. 15 17
903 60.72 atmosphere 1015.0 90 < th dose independent rect. 8 19
945 60.78 wind 1.0 270 > th dose independent rect. 11 9
946 60.78 radiation 40.0 90 < th dose independent rect. 3 16
960 60.82 wind 9.0 270 < th dose independent rect. 2 15
966 60.83 atmosphere 1015.0 10 < th dose independent rect. 15 17