BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0498500 Os06g0498500|AK103794
         (846 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79150.1  | chr1:29772716-29777874 REVERSE LENGTH=831          655   0.0  

>AT1G79150.1 | chr1:29772716-29777874 REVERSE LENGTH=831
          Length = 830

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/619 (55%), Positives = 469/619 (75%), Gaps = 17/619 (2%)

Query: 203 QLAEIGMSMLEDPESHIRSLNDMLNICNDKDQKVVKLSLMSLLAVFRDIIPSYRIRQLTE 262
           ++AE+GM +L DPE++I++L DML+IC D++ K+VKL+L+SLLAVF+DIIP YRIR  TE
Sbjct: 193 KIAELGMLLLSDPEANIKTLKDMLDICKDQNTKIVKLALLSLLAVFKDIIPGYRIRLPTE 252

Query: 263 KELTVEVSKDVKKMRYYEYTLLRSYKAYLQKLISLEKQPNFSALAVRCMCTLLDTAPHFN 322
           KEL +++SK+VKK R+YE TLL++YK+YLQKLI  EKQ  ++ +A RC+CTLL+  PHFN
Sbjct: 253 KELEMKISKEVKKTRFYESTLLKAYKSYLQKLIIFEKQSVYNQIANRCLCTLLEAVPHFN 312

Query: 323 FRESILASVARNLSSPDDAVRKMCCETIRSLFVDEGKHRGEATVEAVRLIADHVKLNDCQ 382
           +R+++L +V RN+SSPD+ VR++CC TIR LF +EGKH GE TV+AVRLIADHVK ++CQ
Sbjct: 313 YRDNLLIAVVRNISSPDEVVRRLCCSTIRYLFSNEGKHGGELTVQAVRLIADHVKAHNCQ 372

Query: 383 LHPDSIEVFLSLRFDDDLGKDDTEEE-KGKPKKNKRRQNQEVPKQLPVSDNKKAKQELIS 441
           LHP++IEVF+S+RFD+D+GK + E+E   K KKN +R+ QE   Q+  ++ KK+K++++S
Sbjct: 373 LHPNAIEVFMSIRFDEDIGKPNKEDEHNKKYKKNNKRKTQEEQNQVQENERKKSKKDMMS 432

Query: 442 KAREEVDAELRSVSFTLDPKERRRIQKEALSALFETYFRILKHSMSISNSRGKVI---NV 498
           K R+EV A+ R V++  D KERR++Q E LSA+FETYFRIL+++M     R + I   N 
Sbjct: 433 KIRDEVSADHRGVTYEPDAKERRKMQTETLSAVFETYFRILRNTMYTIGERTEEIPTSNP 492

Query: 499 SPDGSHPLLAPCLEGLGKFSHLIDLDFMGELVACLKKLS-GYTDHHSGTVHDNT--LSVS 555
              GSHPLLAPCL+GL KF+  +DLD+MG+L+  LKKL+   +   + T   N+  L+VS
Sbjct: 493 GAFGSHPLLAPCLDGLAKFTQQLDLDYMGDLMNYLKKLASSSSSVSNNTKQKNSKLLTVS 552

Query: 556 ERLQCCIVAFKVWRSNLEALNVDLQDFFVQLFNLILEYRPDRDRGEVLADALKTLLWEGK 615
           ERL+CC+VAFKV RSNL ALNVDLQDFFVQL+NLILEYRP RD G +LA++LK +L + +
Sbjct: 553 ERLRCCLVAFKVMRSNLNALNVDLQDFFVQLYNLILEYRPGRDSGVILAESLKIMLCDDR 612

Query: 616 QQDMIRAAAFIKRLATFALSFGSAEAMAALITLKHLLQKNSKCRNMLENDSGGGSLSCLV 675
            QDM +AAAF+KRLATFAL FG AE+M+AL+TLK LLQKN KCRN+LEND+GGGS+S  +
Sbjct: 613 HQDMQKAAAFVKRLATFALCFGCAESMSALVTLKTLLQKNVKCRNLLENDAGGGSVSGSI 672

Query: 676 AKYDPEAKDPYLSGALASVLWELSLLQKHYDSSVSSMASNILSMANLNPTQNPVPISNAS 735
           AKY P A DP LSGALA+VLWELSLL KHY  ++S+MA+ +   +N+N +Q+   +S  +
Sbjct: 673 AKYQPYATDPNLSGALATVLWELSLLSKHYHPAISTMATTV---SNMNTSQSQTFLSAVT 729

Query: 736 PLEAYRDLSMERKLSKPANKLLPLNCRKKRRGKEFVALSPAALEGSDCVAGGDELKEKLK 795
           P +A+ D S+ ++  +P N+   LN ++KR   E +      +   D V    +L +KLK
Sbjct: 730 PQQAFADFSLVKESFEPKNESRKLNNKRKR---ESLPEEAKNVPEIDMV----KLSKKLK 782

Query: 796 NHFAVLRGISENERLRAEL 814
            +F +LR I E+ER+R EL
Sbjct: 783 ENFTILRDIKEDERVRMEL 801



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,291,248
Number of extensions: 612877
Number of successful extensions: 2649
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2645
Number of HSP's successfully gapped: 1
Length of query: 846
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 739
Effective length of database: 8,173,057
Effective search space: 6039889123
Effective search space used: 6039889123
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)