Os06g0498100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os06g0498100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.48 | 0.383 | 3.19 | 0.127 | 0.11 | 4.19 | 0.0865 | -0.509 | 0.00973 | 9.13 | 0.5885 | 11 | -- | -- |
| 67.48 | 0.386 | 3.19 | 0.128 | 0.11 | 4.05 | 0.0866 | -- | 0.00971 | 9.13 | 0.5982 | 11 | -- | -- |
| 67.5 | 0.383 | 3.19 | 0.129 | 0.111 | 4.18 | -- | -0.461 | 0.00952 | 8.82 | 0.5895 | 11 | -- | -- |
| 67.5 | 0.385 | 3.19 | 0.13 | 0.111 | 4.04 | -- | -- | 0.00954 | 8.82 | 0.6109 | 11 | -- | -- |
| 68.21 | 0.385 | 3.2 | 0.13 | -- | 4.14 | -- | -0.285 | 0.0104 | -- | 0.5926 | 11 | -- | -- |
| 83.65 | 0.429 | 3.2 | 0.166 | 0.128 | -- | 0.114 | -- | 0.00191 | 7.89 | -- | -- | -- | -- |
| 83.69 | 0.428 | 3.2 | 0.169 | 0.128 | -- | -- | -- | 0.00172 | 7.8 | -- | -- | -- | -- |
| 68.21 | 0.386 | 3.2 | 0.13 | -- | 4.06 | -- | -- | 0.0104 | -- | 0.5982 | 11 | -- | -- |
| 67.95 | 0.386 | 3.2 | -- | 0.111 | 4.08 | -- | -- | -0.00489 | 8.75 | 0.6147 | 11 | -- | -- |
| 84.58 | 0.43 | 3.2 | 0.171 | -- | -- | -- | -- | 0.00351 | -- | -- | -- | -- | -- |
| 84.45 | 0.43 | 3.2 | -- | 0.129 | -- | -- | -- | -0.0171 | 7.71 | -- | -- | -- | -- |
| 68.65 | 0.387 | 3.2 | -- | -- | 4.09 | -- | -- | -0.00398 | -- | 0.5982 | 11 | -- | -- |
| 85.35 | 0.431 | 3.2 | -- | -- | -- | -- | -- | -0.0154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.44 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 3 | 67.44 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 5 | 67.48 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 6 | 67.48 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 14 | 67.48 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 15 | 67.48 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 152 | 67.81 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 5 | NA |
| 227 | 67.92 | precipitation | 0.1 | 10 | < th | dose independent | sin | 5 | NA |
| 230 | 67.92 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 5 | NA |
| 299 | 68.08 | precipitation | 0.1 | 10 | > th | dose independent | sin | 5 | NA |
| 674 | 69.46 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 744 | 69.60 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 975 | 71.15 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 976 | 71.15 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |