Os06g0495800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF617, plant family protein.
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Os06g0495800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF617, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.07 | 0.446 | 8.46 | 0.173 | 0.87 | 0.0279 | -0.387 | -4.72 | -0.198 | 0.61 | 21.51 | 10 | -- | -- |
| 103.76 | 0.474 | 8.36 | 1 | 0.834 | -0.293 | 0.794 | -- | 0.0474 | 0.644 | 18 | 2 | -- | -- |
| 90.19 | 0.442 | 8.46 | 0.206 | 0.878 | 0.0544 | -- | -4.53 | -0.193 | 0.594 | 22 | 66 | -- | -- |
| 106.14 | 0.48 | 8.36 | 0.956 | 0.824 | -0.289 | -- | -- | 0.0576 | 0.586 | 21.85 | 64 | -- | -- |
| 123.88 | 0.518 | 8.39 | 0.548 | -- | -0.815 | -- | -3.51 | -0.00232 | -- | 20.7 | 7 | -- | -- |
| 104.93 | 0.48 | 8.37 | 0.941 | 0.92 | -- | 0.826 | -- | -0.00166 | 0.829 | -- | -- | -- | -- |
| 107.81 | 0.486 | 8.38 | 0.911 | 0.918 | -- | -- | -- | -0.00572 | 0.78 | -- | -- | -- | -- |
| 135.8 | 0.545 | 8.32 | 1.16 | -- | -1.08 | -- | -- | 0.181 | -- | 18.9 | 6 | -- | -- |
| 129.63 | 0.533 | 8.4 | -- | 0.913 | -0.0569 | -- | -- | -0.102 | 0.777 | 24.21 | 78 | -- | -- |
| 160.49 | 0.592 | 8.36 | 0.944 | -- | -- | -- | -- | 0.011 | -- | -- | -- | -- | -- |
| 129.69 | 0.533 | 8.4 | -- | 0.933 | -- | -- | -- | -0.107 | 0.824 | -- | -- | -- | -- |
| 167.29 | 0.604 | 8.37 | -- | -- | -0.809 | -- | -- | -0.0216 | -- | 24.21 | 78 | -- | -- |
| 184.02 | 0.633 | 8.38 | -- | -- | -- | -- | -- | -0.0938 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.40 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 2 | 75.64 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 3 | 75.93 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 7 | 77.94 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 8 | 78.39 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 10 | 78.62 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 11 | 78.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 13 | 78.69 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 14 | 78.70 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 18 | 78.86 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 20 | 78.91 | radiation | 20 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 21 | 78.98 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 24 | 79.04 | radiation | 20 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 27 | 79.14 | radiation | 10 | 43200 | > th | dose independent | sin | 13 | NA |
| 30 | 79.15 | radiation | 10 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 32 | 79.23 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 36 | 79.32 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 40 | 79.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 41 | 79.37 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 62 | 79.47 | radiation | 20 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 90 | 79.68 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 117 | 79.72 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 140 | 79.75 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 144 | 79.76 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 152 | 79.81 | radiation | 10 | 43200 | > th | dose independent | sin | 21 | NA |
| 153 | 79.81 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 156 | 79.82 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 165 | 79.88 | humidity | 60 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 167 | 79.89 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 172 | 79.93 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 177 | 79.95 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 194 | 79.98 | radiation | 10 | 43200 | > th | dose independent | no | NA | NA |
| 195 | 79.98 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 12 |
| 349 | 80.21 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 359 | 80.22 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 372 | 80.24 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 401 | 80.28 | temperature | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 409 | 80.31 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 507 | 80.42 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 531 | 80.48 | radiation | 20 | 43200 | < th | dose dependent | sin | 18 | NA |
| 585 | 80.55 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 588 | 80.56 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 606 | 80.58 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 639 | 80.64 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 681 | 80.72 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 689 | 80.73 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 758 | 80.81 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 770 | 80.82 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 772 | 80.83 | humidity | 70 | 43200 | < th | dose independent | sin | 21 | NA |
| 777 | 80.83 | wind | 3 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 785 | 80.84 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 808 | 80.88 | radiation | 10 | 43200 | < th | dose dependent | sin | 22 | NA |
| 826 | 80.91 | temperature | 30 | 43200 | > th | dose independent | sin | 9 | NA |
| 851 | 80.92 | temperature | 30 | 43200 | > th | dose dependent | sin | 9 | NA |
| 878 | 80.94 | temperature | 30 | 43200 | < th | dose independent | sin | 9 | NA |
| 892 | 80.95 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 11 |