Os06g0494700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0494700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.84 | 0.514 | 9.19 | 2.09 | 1.22 | -2.24 | 1.11 | 2.82 | 0.0551 | 6.81 | 18 | 4359 | -- | -- |
| 135.11 | 0.541 | 9.23 | 1.9 | 1.31 | -2.35 | 1.2 | -- | 0.14 | 6.85 | 15.26 | 7185 | -- | -- |
| 123 | 0.517 | 9.19 | 2.12 | 1.22 | -2.25 | -- | 2.86 | 0.0554 | 6.77 | 17.94 | 4355 | -- | -- |
| 127.49 | 0.526 | 9.3 | 1.44 | 1.15 | -2.64 | -- | -- | -0.134 | 6.37 | 13.86 | 3777 | -- | -- |
| 188.73 | 0.64 | 9.21 | 2.16 | -- | -2.36 | -- | 3.14 | 0.119 | -- | 18.16 | 3486 | -- | -- |
| 242.41 | 0.73 | 9.41 | 0.265 | 1.18 | -- | 1.24 | -- | -0.632 | 7.11 | -- | -- | -- | -- |
| 246.44 | 0.735 | 9.41 | 0.289 | 1.18 | -- | -- | -- | -0.635 | 7.08 | -- | -- | -- | -- |
| 175.81 | 0.618 | 9.3 | 1.31 | -- | -2.84 | -- | -- | -0.0461 | -- | 14.78 | 2036 | -- | -- |
| 156.89 | 0.583 | 9.32 | -- | 1.09 | -1.83 | -- | -- | -0.303 | 6.87 | 18.92 | 1802 | -- | -- |
| 319.69 | 0.835 | 9.44 | 0.312 | -- | -- | -- | -- | -0.614 | -- | -- | -- | -- | -- |
| 248.64 | 0.738 | 9.42 | -- | 1.18 | -- | -- | -- | -0.667 | 7.06 | -- | -- | -- | -- |
| 155.66 | 0.581 | 9.36 | -- | -- | -2.58 | -- | -- | -0.292 | -- | 19 | 513 | -- | -- |
| 322.26 | 0.838 | 9.45 | -- | -- | -- | -- | -- | -0.648 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 8 | 112.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 19 | 112.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 23 | 113.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 42 | 113.71 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 61 | 114.25 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 62 | 114.28 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 67 | 114.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 75 | 114.52 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 90 | 114.66 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 100 | 114.71 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 110 | 114.81 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 218 | 115.57 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 231 | 115.69 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 308 | 116.10 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 484 | 116.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 9 |