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Os06g0492700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dynein light chain, type 1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0177) R2 : 0.0635
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.208 (0.0374) R2dN8 : 0.082 R2N8 : 0.0635
σ : 0.334
deviance : 51.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.13 0.226 13.1 -0.755 0.571 -1.01 0.631 0.0624 0.102 3.54 1.105 772 -- --
23.1 0.224 13.1 -0.756 0.574 -1.03 0.664 -- 0.101 3.61 0.84 775 -- --
23.8 0.227 13.1 -0.785 0.572 -1.02 -- 0.663 0.0894 3.55 0.8805 771 -- --
24.42 0.23 13.1 -0.768 0.557 -0.995 -- -- 0.0963 3.51 0.8401 779 -- --
24.64 0.231 13.1 -0.743 -- -0.936 -- -0.552 0.0449 -- 0.7143 1205 -- --
25.94 0.239 13.1 -0.673 0.475 -- 0.133 -- 0.135 21.4 -- -- -- --
26 0.239 13.1 -0.678 0.476 -- -- -- 0.135 21.3 -- -- -- --
24.69 0.231 13.1 -0.804 -- -0.824 -- -- 0.077 -- 0.7662 1139 -- --
36.68 0.284 13.1 -- 0.289 0.251 -- -- 0.214 18.8 0.8401 779 -- --
39.22 0.293 13.1 -0.675 -- -- -- -- 0.133 -- -- -- -- --
38.1 0.289 13.1 -- 0.476 -- -- -- 0.21 21.2 -- -- -- --
40.45 0.296 13.1 -- -- -0.666 -- -- 0.169 -- 1.709 1114 -- --
51.25 0.334 13.1 -- -- -- -- -- 0.208 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.96 temperature 10.0 270 > th dose dependent rect. 21 14
3 21.23 temperature 10.0 270 > th dose dependent rect. 7 18
6 21.32 temperature 30.0 270 < th dose dependent rect. 23 8
10 21.44 temperature 10.0 270 > th dose dependent rect. 17 9
14 21.54 temperature 30.0 270 < th dose dependent rect. 1 6
21 21.62 temperature 10.0 10 > th dose dependent rect. 8 21
65 22.02 wind 7.0 270 < th dose independent rect. 16 10
70 22.04 temperature 30.0 270 < th dose dependent rect. 15 16
73 22.05 wind 9.0 270 < th dose independent rect. 6 21
74 22.05 wind 9.0 270 < th dose dependent rect. 16 10
76 22.07 temperature 10.0 10 > th dose dependent rect. 23 13
87 22.12 radiation 1.0 720 < th dose dependent rect. 17 6
96 22.14 wind 7.0 270 < th dose independent rect. 21 14
97 22.14 wind 7.0 270 < th dose independent rect. 7 18
107 22.16 wind 1.0 270 > th dose independent rect. 1 6
118 22.21 temperature 10.0 270 > th dose dependent rect. 7 4
125 22.22 precipitation 0.1 270 < th dose independent rect. 6 21
127 22.22 temperature 10.0 10 > th dose dependent rect. 9 15
131 22.22 precipitation 0.1 270 < th dose dependent rect. 6 21
138 22.24 precipitation 0.1 270 < th dose independent rect. 3 3
140 22.24 precipitation 0.1 270 < th dose dependent rect. 3 3
143 22.25 temperature 20.0 270 > th dose independent rect. 17 9
147 22.26 wind 1.0 270 > th dose independent rect. 3 3
148 22.26 wind 7.0 270 < th dose independent rect. 3 3
150 22.26 temperature 30.0 270 < th dose dependent sin 9 NA
158 22.28 temperature 10.0 270 > th dose independent rect. 3 3
160 22.28 temperature 30.0 270 < th dose independent rect. 3 3
161 22.28 humidity 50.0 270 > th dose independent rect. 3 3
164 22.28 atmosphere 995.0 270 > th dose independent rect. 3 3
165 22.28 atmosphere 1015.0 270 < th dose independent rect. 3 3
166 22.28 radiation 20.0 270 < th dose independent rect. 3 3
171 22.28 temperature 10.0 270 > th dose independent rect. 6 21
172 22.28 temperature 30.0 90 < th dose dependent sin 7 NA
182 22.30 atmosphere 1010.0 270 < th dose independent rect. 2 5
183 22.30 radiation 40.0 270 < th dose dependent rect. 3 3
200 22.34 temperature 20.0 90 > th dose independent rect. 8 20
205 22.36 temperature 10.0 270 > th dose dependent sin 10 NA
220 22.38 precipitation 0.1 270 < th dose independent rect. 7 19
222 22.38 radiation 1.0 270 < th dose dependent rect. 3 7
223 22.38 radiation 1.0 270 < th dose dependent rect. 3 9
227 22.38 precipitation 0.1 270 < th dose dependent rect. 7 19
231 22.39 radiation 30.0 270 < th dose dependent rect. 2 5
236 22.40 precipitation 0.1 270 < th dose independent rect. 2 5
239 22.40 precipitation 0.1 270 < th dose dependent rect. 2 5
242 22.41 wind 7.0 270 < th dose independent rect. 2 5
244 22.41 radiation 1.0 270 < th dose independent rect. 3 7
259 22.43 wind 7.0 270 < th dose independent rect. 7 4
261 22.43 temperature 10.0 270 > th dose independent rect. 2 5
263 22.43 temperature 30.0 270 < th dose independent rect. 2 5
264 22.43 humidity 50.0 270 > th dose independent rect. 2 5
267 22.43 atmosphere 995.0 270 > th dose independent rect. 2 5
269 22.43 radiation 20.0 270 < th dose independent rect. 2 5
275 22.43 temperature 10.0 270 > th dose independent rect. 7 19
278 22.43 wind 9.0 270 < th dose dependent rect. 7 4
280 22.44 temperature 15.0 270 > th dose independent rect. 21 14
298 22.45 atmosphere 1015.0 270 < th dose independent rect. 7 18
311 22.47 temperature 10.0 270 > th dose independent rect. 11 10
314 22.47 atmosphere 995.0 270 > th dose independent rect. 21 14
317 22.47 radiation 10.0 43200 < th dose dependent rect. 19 9
323 22.48 radiation 1.0 270 > th dose independent rect. 7 4
342 22.49 wind 1.0 270 > th dose independent rect. 11 20
343 22.49 humidity 80.0 43200 < th dose dependent rect. 8 1
355 22.50 temperature 20.0 10 > th dose independent rect. 23 13
357 22.50 temperature 10.0 90 > th dose dependent sin 8 NA
358 22.50 radiation 10.0 10 < th dose dependent sin 12 NA
371 22.51 temperature 15.0 270 > th dose independent rect. 7 4
383 22.52 wind 9.0 720 < th dose independent rect. 7 12
384 22.52 humidity 50.0 270 > th dose independent rect. 21 14
385 22.52 precipitation 0.1 270 < th dose independent rect. 21 14
389 22.52 precipitation 0.1 270 < th dose dependent rect. 21 14
395 22.53 precipitation 0.1 270 < th dose independent rect. 16 10
397 22.53 wind 7.0 90 < th dose independent rect. 9 18
401 22.53 precipitation 0.1 270 < th dose dependent rect. 16 10
417 22.54 wind 9.0 270 < th dose dependent rect. 3 3
452 22.57 wind 9.0 270 < th dose dependent rect. 21 14
457 22.58 humidity 60.0 270 > th dose independent rect. 7 4
480 22.59 temperature 20.0 10 > th dose independent rect. 8 21
481 22.59 atmosphere 995.0 270 > th dose dependent rect. 3 3
487 22.60 radiation 30.0 270 < th dose independent rect. 16 10
489 22.60 precipitation 0.1 270 < th dose independent rect. 2 14
495 22.60 precipitation 0.1 270 < th dose dependent rect. 2 14
499 22.61 temperature 10.0 270 > th dose independent rect. 16 10
502 22.61 temperature 10.0 270 > th dose independent rect. 2 14
503 22.61 atmosphere 1015.0 270 < th dose independent rect. 2 14
504 22.61 temperature 10.0 720 > th dose dependent rect. 16 3
505 22.61 humidity 50.0 270 > th dose dependent rect. 3 3
513 22.62 humidity 80.0 43200 < th dose dependent rect. 6 4
521 22.63 precipitation 0.1 270 < th dose independent rect. 11 10
528 22.63 precipitation 0.1 270 < th dose dependent rect. 11 10
533 22.64 humidity 90.0 270 < th dose independent rect. 7 4
547 22.65 atmosphere 995.0 270 > th dose independent rect. 11 10
554 22.65 wind 9.0 720 < th dose independent rect. 23 20
568 22.66 wind 9.0 270 < th dose independent rect. 11 10
593 22.69 precipitation 0.1 270 < th dose independent rect. 7 4
594 22.69 atmosphere 995.0 270 > th dose independent rect. 2 14
597 22.69 atmosphere 995.0 270 > th dose independent rect. 11 20
599 22.69 precipitation 0.1 270 < th dose dependent rect. 7 4
625 22.71 atmosphere 995.0 270 > th dose independent rect. 7 4
626 22.71 atmosphere 1015.0 270 < th dose independent rect. 7 4
629 22.71 atmosphere 1015.0 270 < th dose independent rect. 11 10
631 22.71 temperature 20.0 10 > th dose independent rect. 18 11
632 22.71 temperature 10.0 270 > th dose independent rect. 11 20
670 22.74 humidity 70.0 43200 < th dose independent rect. 4 6
709 22.76 humidity 70.0 43200 < th dose independent rect. 7 3
717 22.76 radiation 40.0 270 < th dose independent rect. 7 19
718 22.76 atmosphere 995.0 270 > th dose independent rect. 6 21
720 22.76 wind 9.0 270 < th dose dependent rect. 2 5
726 22.77 radiation 1.0 270 < th dose independent sin 4 NA
735 22.77 radiation 1.0 720 > th dose independent rect. 16 19
745 22.77 wind 9.0 270 < th dose dependent rect. 7 18
763 22.78 wind 9.0 270 < th dose independent rect. 2 14
789 22.79 humidity 50.0 270 > th dose dependent rect. 2 5
823 22.80 wind 1.0 270 > th dose independent rect. 7 18
825 22.80 atmosphere 995.0 270 > th dose independent rect. 7 19
833 22.80 wind 9.0 90 < th dose dependent rect. 9 10
857 22.81 wind 9.0 10 < th dose independent rect. 8 21
876 22.82 humidity 70.0 43200 > th dose independent rect. 6 4
884 22.82 precipitation 0.1 270 < th dose independent rect. 11 20
890 22.82 temperature 15.0 10 > th dose dependent rect. 21 8
892 22.82 precipitation 0.1 270 < th dose dependent rect. 11 20
898 22.83 wind 7.0 10 < th dose independent rect. 18 11
899 22.83 radiation 20.0 14400 < th dose independent rect. 19 11
916 22.84 radiation 40.0 270 < th dose independent rect. 7 4
929 22.84 radiation 1.0 720 < th dose independent rect. 17 6
934 22.84 atmosphere 1015.0 270 < th dose independent rect. 21 14
942 22.84 temperature 15.0 10 > th dose dependent rect. 9 3
960 22.85 temperature 30.0 90 < th dose dependent rect. 5 2
966 22.85 radiation 40.0 270 < th dose dependent rect. 16 10
971 22.86 radiation 1.0 270 > th dose independent sin 3 NA
983 22.86 radiation 10.0 43200 < th dose dependent rect. 22 6