Os06g0487900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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Os06g0487900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.1 | 0.157 | 11.8 | -0.0836 | 0.306 | -0.69 | -0.232 | 0.773 | -0.00601 | 23 | 26.52 | 362 | -- | -- |
| 11.77 | 0.16 | 11.8 | 0.062 | 0.306 | -0.722 | -0.255 | -- | 0.0288 | 22.6 | 25.6 | 374 | -- | -- |
| 11.26 | 0.156 | 11.8 | -0.0862 | 0.27 | -0.676 | -- | 0.801 | -0.00414 | 22.3 | 25.8 | 470 | -- | -- |
| 11.99 | 0.161 | 11.8 | 0.0636 | 0.311 | -0.739 | -- | -- | 0.0284 | 22.7 | 25.65 | 363 | -- | -- |
| 14.25 | 0.176 | 11.8 | -0.156 | -- | -0.804 | -- | 0.896 | -0.0385 | -- | 27.37 | 703 | -- | -- |
| 19.56 | 0.207 | 11.8 | 0.243 | 0.354 | -- | -0.304 | -- | 0.187 | 21.4 | -- | -- | -- | -- |
| 19.89 | 0.209 | 11.8 | 0.254 | 0.355 | -- | -- | -- | 0.188 | 21.5 | -- | -- | -- | -- |
| 15.17 | 0.181 | 11.8 | 0.0142 | -- | -0.847 | -- | -- | -0.000477 | -- | 26.6 | 704 | -- | -- |
| 12.09 | 0.162 | 11.8 | -- | 0.314 | -0.763 | -- | -- | 0.0176 | 22.8 | 25.7 | 355 | -- | -- |
| 27.29 | 0.244 | 11.8 | 0.256 | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
| 21.6 | 0.217 | 11.8 | -- | 0.355 | -- | -- | -- | 0.159 | 21.5 | -- | -- | -- | -- |
| 15.17 | 0.181 | 11.8 | -- | -- | -0.855 | -- | -- | -0.00504 | -- | 26.6 | 706 | -- | -- |
| 29.03 | 0.251 | 11.8 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 6 | 11.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 17 | 11.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 35 | 11.46 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 49 | 11.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 55 | 11.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 102 | 11.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 106 | 11.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 147 | 11.59 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 181 | 11.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 193 | 11.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 224 | 11.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 281 | 11.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 294 | 11.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 358 | 11.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 379 | 11.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 618 | 11.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 641 | 11.95 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 693 | 11.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 826 | 12.08 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 913 | 12.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 914 | 12.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 929 | 12.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 932 | 12.15 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |