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Os06g0484500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0181) R2 : 0.664
β1 : -1.51 (0.0677) R2dD : 0.408 R2D : 0.113
β2 : 1.13 (0.0483) R2dC : 0.519 R2C : 0.141
β3 : -1.16 (0.0869) R2dE : 0.219 R2E : -0.377
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.574 (0.0419) R2dN8 : 0.244 R2N8 : -0.061
σ : 0.328
deviance : 49.54
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C
peak time of C : 1.39
E
wheather : temperature
threshold : 27.49
memory length : 56
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.19 0.323 13.5 -1.38 1.15 -1.19 -0.45 -0.698 -0.566 1.4 27.6 12 -- --
47.84 0.322 13.5 -1.5 1.17 -1.19 -0.687 -- -0.581 1.35 28 7 -- --
47.76 0.322 13.5 -1.35 1.14 -1.21 -- -0.947 -0.561 1.35 27.41 21 -- --
49.54 0.328 13.5 -1.51 1.13 -1.16 -- -- -0.574 1.39 27.49 56 -- --
77.37 0.41 13.5 -1.59 -- -1.4 -- 0.0469 -0.566 -- 26.89 944 -- --
66.86 0.383 13.5 -1.23 0.793 -- -0.773 -- -0.34 1.11 -- -- -- --
69.34 0.39 13.5 -1.2 0.794 -- -- -- -0.336 1.09 -- -- -- --
76.93 0.409 13.5 -1.58 -- -1.4 -- -- -0.635 -- 26.7 948 -- --
102.16 0.473 13.5 -- 0.941 -0.575 -- -- -0.312 1.2 27.5 22 -- --
108.44 0.487 13.4 -1.17 -- -- -- -- -0.32 -- -- -- -- --
107.44 0.485 13.4 -- 0.774 -- -- -- -0.202 1.03 -- -- -- --
134.89 0.541 13.4 -- -- -0.728 -- -- -0.33 -- 26.7 906 -- --
144.68 0.561 13.4 -- -- -- -- -- -0.19 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.15 temperature 20 270 > th dose dependent rect. 18 16
4 46.11 temperature 15 270 > th dose dependent rect. 16 21
7 46.30 temperature 15 10 > th dose dependent rect. 7 21
19 47.11 temperature 30 270 < th dose dependent rect. 9 21
29 47.38 temperature 15 90 > th dose dependent rect. 18 23
38 47.60 temperature 30 90 < th dose dependent rect. 9 23
41 47.67 temperature 30 90 < th dose dependent sin 7 NA
48 47.79 temperature 30 10 < th dose dependent rect. 10 22
58 48.01 temperature 15 10 > th dose dependent rect. 7 18
60 48.03 temperature 30 90 < th dose dependent rect. 19 23
70 48.18 temperature 15 90 > th dose dependent rect. 7 18
77 48.29 temperature 25 90 < th dose dependent rect. 23 23
79 48.32 temperature 15 90 > th dose dependent sin 7 NA
92 48.46 temperature 30 10 < th dose dependent rect. 13 23
95 48.51 temperature 30 90 < th dose dependent rect. 13 18
114 48.66 temperature 30 10 < th dose dependent rect. 1 23
115 48.68 temperature 30 10 < th dose dependent no NA NA
116 48.68 temperature 30 90 < th dose dependent rect. 23 19
144 48.84 temperature 30 10 < th dose dependent rect. 23 23
157 48.91 temperature 30 10 < th dose dependent rect. 15 23
159 48.94 temperature 30 270 < th dose dependent rect. 21 21
197 49.24 temperature 30 30 < th dose dependent rect. 3 23
211 49.30 temperature 25 30 < th dose dependent rect. 7 23
222 49.34 temperature 25 30 < th dose dependent rect. 17 23
274 49.60 temperature 10 10 > th dose dependent no NA NA
329 49.84 temperature 25 270 > th dose independent rect. 15 22
382 50.10 temperature 25 30 < th dose dependent rect. 5 23
390 50.13 temperature 25 270 > th dose independent rect. 17 18
417 50.22 temperature 25 720 < th dose dependent rect. 5 18
432 50.30 temperature 25 270 > th dose independent rect. 18 16
519 50.54 wind 9 14400 > th dose dependent rect. 4 9
560 50.70 wind 9 14400 > th dose independent rect. 3 10
572 50.72 wind 3 43200 > th dose independent rect. 1 1
605 50.81 temperature 15 10 > th dose dependent rect. 15 23
665 51.00 temperature 20 1440 > th dose independent rect. 22 14
679 51.04 temperature 20 1440 > th dose independent rect. 22 8
680 51.04 temperature 20 1440 > th dose independent rect. 22 16
683 51.05 temperature 20 1440 > th dose independent rect. 3 2
688 51.06 temperature 20 1440 < th dose independent rect. 3 2
696 51.07 temperature 20 270 > th dose independent rect. 5 21
707 51.10 temperature 20 1440 > th dose independent sin 7 NA
741 51.16 temperature 25 270 < th dose independent rect. 9 21
771 51.21 temperature 20 1440 > th dose independent rect. 1 5
785 51.23 temperature 25 1440 < th dose dependent rect. 21 1
801 51.25 temperature 20 1440 < th dose independent rect. 23 13
821 51.29 temperature 20 1440 < th dose independent sin 7 NA
825 51.29 temperature 20 1440 < th dose independent rect. 23 15
831 51.30 temperature 25 720 < th dose dependent sin 22 NA
853 51.32 temperature 25 1440 < th dose dependent sin 14 NA
854 51.32 temperature 25 1440 < th dose dependent rect. 17 9
856 51.32 temperature 25 1440 < th dose dependent rect. 16 13
873 51.34 temperature 20 1440 < th dose independent rect. 23 7
888 51.35 temperature 25 1440 < th dose dependent rect. 17 7
927 51.38 temperature 20 1440 > th dose independent rect. 16 14
932 51.38 temperature 25 1440 < th dose dependent rect. 10 20