Os06g0474300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Methyltransferase type 11 domain containing protein.
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Os06g0474300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Methyltransferase type 11 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.75 | 0.357 | 3.08 | 0.0832 | 0.0371 | 0.374 | -0.128 | -0.233 | 0.182 | 5.43 | 24 | 795 | -- | -- |
| 57.83 | 0.354 | 3.08 | 0.0671 | 0.0396 | 0.415 | -0.109 | -- | 0.178 | 5.1 | 23.77 | 823 | -- | -- |
| 57.78 | 0.354 | 3.07 | 0.0864 | 0.038 | 0.38 | -- | -0.244 | 0.184 | 3.93 | 24.04 | 791 | -- | -- |
| 57.85 | 0.354 | 3.08 | 0.0488 | 0.0415 | 0.416 | -- | -- | 0.176 | 4.04 | 23.8 | 821 | -- | -- |
| 57.84 | 0.354 | 3.07 | 0.0895 | -- | 0.37 | -- | -0.274 | 0.186 | -- | 24.08 | 720 | -- | -- |
| 60.11 | 0.363 | 3.1 | -0.0602 | 0.0543 | -- | -0.196 | -- | 0.0994 | 7.93 | -- | -- | -- | -- |
| 60.22 | 0.363 | 3.1 | -0.0656 | 0.0546 | -- | -- | -- | 0.0995 | 7.81 | -- | -- | -- | -- |
| 57.93 | 0.354 | 3.08 | 0.0495 | -- | 0.409 | -- | -- | 0.174 | -- | 23.81 | 742 | -- | -- |
| 57.9 | 0.354 | 3.08 | -- | 0.0407 | 0.393 | -- | -- | 0.167 | 4.08 | 23.8 | 818 | -- | -- |
| 60.38 | 0.363 | 3.1 | -0.0649 | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
| 60.34 | 0.363 | 3.09 | -- | 0.0541 | -- | -- | -- | 0.107 | 7.9 | -- | -- | -- | -- |
| 57.98 | 0.355 | 3.08 | -- | -- | 0.389 | -- | -- | 0.167 | -- | 23.8 | 732 | -- | -- |
| 60.49 | 0.363 | 3.1 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.72 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 2 | 55.87 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 3 | 55.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 5 | 55.93 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 8 | 56.03 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 16 | 56.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 20 | 56.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 24 | 56.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 27 | 56.19 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 37 | 56.22 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 92 | 56.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 95 | 56.49 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 5 |
| 110 | 56.53 | temperature | 25.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 111 | 56.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 3 |
| 125 | 56.57 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 155 | 56.64 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 157 | 56.65 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 170 | 56.67 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 183 | 56.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 191 | 56.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 2 |
| 206 | 56.74 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 207 | 56.74 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 213 | 56.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 13 |
| 231 | 56.78 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 234 | 56.79 | wind | 7.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 280 | 56.84 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 299 | 56.86 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 315 | 56.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 333 | 56.91 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 373 | 56.95 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 394 | 56.98 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 429 | 57.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 441 | 57.03 | temperature | 25.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 442 | 57.03 | wind | 1.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 460 | 57.05 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 465 | 57.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 11 |
| 492 | 57.08 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 493 | 57.08 | temperature | 20.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 494 | 57.08 | wind | 1.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 525 | 57.11 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 3 |
| 526 | 57.11 | temperature | 10.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 559 | 57.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 561 | 57.13 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 566 | 57.13 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 597 | 57.15 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 632 | 57.17 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 641 | 57.18 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 661 | 57.20 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 10 |
| 671 | 57.20 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 678 | 57.21 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 1 |
| 711 | 57.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 12 |
| 744 | 57.25 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 795 | 57.28 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 798 | 57.28 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 815 | 57.28 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 823 | 57.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 846 | 57.30 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 884 | 57.32 | atmosphere | 1010.0 | 30 | > th | dose independent | rect. | 11 | 1 |