Os06g0472000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mss4-like domain containing protein.
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Os06g0472000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mss4-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.66 | 0.481 | 11.2 | -0.738 | 2.27 | 1.39 | 1.23 | 0.574 | -0.686 | 8.73 | 82.46 | 859 | -- | -- |
| 104.24 | 0.476 | 11.2 | -0.793 | 2.16 | 1.5 | 1.1 | -- | -0.699 | 8.94 | 82.09 | 952 | -- | -- |
| 107.93 | 0.484 | 11.2 | -0.74 | 2.14 | 1.41 | -- | -0.193 | -0.691 | 8.79 | 82.1 | 949 | -- | -- |
| 107.77 | 0.483 | 11.3 | -0.741 | 2.15 | 1.46 | -- | -- | -0.699 | 8.89 | 82.35 | 951 | -- | -- |
| 278.64 | 0.777 | 11.3 | -0.696 | -- | 1.04 | -- | 0.474 | -0.742 | -- | 85.75 | 1450 | -- | -- |
| 142.2 | 0.559 | 11.3 | -0.574 | 1.71 | -- | 0.747 | -- | -0.748 | 8.58 | -- | -- | -- | -- |
| 143.99 | 0.562 | 11.3 | -0.551 | 1.71 | -- | -- | -- | -0.748 | 8.55 | -- | -- | -- | -- |
| 278.94 | 0.778 | 11.3 | -0.678 | -- | 1.09 | -- | -- | -0.719 | -- | 86 | 1445 | -- | -- |
| 122.23 | 0.515 | 11.3 | -- | 2.21 | 1.46 | -- | -- | -0.709 | 8.9 | 111.7 | 912 | -- | -- |
| 308.73 | 0.821 | 11.3 | -0.544 | -- | -- | -- | -- | -0.732 | -- | -- | -- | -- | -- |
| 152 | 0.577 | 11.3 | -- | 1.71 | -- | -- | -- | -0.687 | 8.57 | -- | -- | -- | -- |
| 290.48 | 0.794 | 11.3 | -- | -- | 1.02 | -- | -- | -0.673 | -- | 90.29 | 1452 | -- | -- |
| 316.55 | 0.83 | 11.3 | -- | -- | -- | -- | -- | -0.672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 2 | 106.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 3 | 106.53 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 5 | 107.13 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 7 | 107.21 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 31 | 107.79 | humidity | 50 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 32 | 107.82 | humidity | 80 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 42 | 107.89 | humidity | 80 | 720 | < th | dose dependent | sin | 19 | NA |
| 49 | 107.94 | humidity | 50 | 720 | > th | dose dependent | sin | 20 | NA |
| 81 | 108.29 | humidity | 80 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 128 | 108.38 | humidity | 80 | 720 | < th | dose dependent | no | NA | NA |
| 131 | 108.38 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 140 | 108.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 175 | 108.54 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 23 |
| 203 | 108.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 246 | 108.92 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 250 | 108.94 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 306 | 109.19 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 339 | 109.32 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 356 | 109.37 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 379 | 109.53 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 390 | 109.56 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 400 | 109.61 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 410 | 109.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 414 | 109.69 | wind | 3 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 421 | 109.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 467 | 109.92 | humidity | 50 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 475 | 109.96 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 479 | 109.98 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 488 | 110.02 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 14 |
| 506 | 110.09 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 555 | 110.35 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 566 | 110.42 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 581 | 110.46 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 18 |
| 669 | 110.95 | humidity | 70 | 720 | > th | dose independent | rect. | 7 | 20 |
| 684 | 111.05 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 10 |
| 689 | 111.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 698 | 111.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 742 | 111.24 | humidity | 70 | 720 | < th | dose independent | rect. | 12 | 23 |
| 777 | 111.42 | humidity | 70 | 720 | > th | dose independent | rect. | 22 | 23 |
| 787 | 111.46 | humidity | 70 | 720 | < th | dose independent | sin | 20 | NA |
| 792 | 111.47 | humidity | 70 | 720 | < th | dose independent | rect. | 10 | 22 |
| 793 | 111.48 | humidity | 70 | 720 | > th | dose independent | sin | 20 | NA |
| 816 | 111.56 | humidity | 70 | 720 | < th | dose independent | rect. | 10 | 10 |
| 841 | 111.63 | humidity | 70 | 720 | > th | dose independent | rect. | 24 | 21 |
| 863 | 111.72 | humidity | 70 | 720 | > th | dose independent | rect. | 24 | 19 |
| 956 | 112.02 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 7 |