Os06g0471100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF159 family protein.
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Os06g0471100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF159 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.37 | 0.454 | 7.83 | -1.25 | 1.72 | -2.94 | -0.306 | -0.824 | -0.304 | 6.58 | 28.85 | 108 | -- | -- |
| 94.31 | 0.452 | 7.84 | -1.36 | 1.75 | -2.91 | -0.331 | -- | -0.323 | 6.66 | 28.71 | 116 | -- | -- |
| 93.37 | 0.45 | 7.83 | -1.22 | 1.73 | -2.96 | -- | -0.989 | -0.302 | 6.6 | 28.5 | 114 | -- | -- |
| 94.67 | 0.453 | 7.85 | -1.4 | 1.72 | -2.94 | -- | -- | -0.344 | 6.61 | 28.73 | 114 | -- | -- |
| 196.52 | 0.656 | 7.82 | -1.05 | -- | -2.84 | -- | -1.53 | -0.125 | -- | 24.2 | 44 | -- | -- |
| 210.04 | 0.679 | 7.71 | -0.634 | 1.38 | -- | -0.654 | -- | 0.266 | 8.74 | -- | -- | -- | -- |
| 211.45 | 0.681 | 7.71 | -0.655 | 1.38 | -- | -- | -- | 0.266 | 8.75 | -- | -- | -- | -- |
| 200.51 | 0.662 | 7.85 | -1.26 | -- | -2.7 | -- | -- | -0.173 | -- | 24.26 | 35 | -- | -- |
| 140.49 | 0.552 | 7.77 | -- | 1.67 | -2.42 | -- | -- | -0.0142 | 7 | 30.86 | 123 | -- | -- |
| 320.14 | 0.836 | 7.75 | -0.653 | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
| 222.77 | 0.698 | 7.7 | -- | 1.38 | -- | -- | -- | 0.339 | 8.79 | -- | -- | -- | -- |
| 238.95 | 0.722 | 7.81 | -- | -- | -2.26 | -- | -- | 0.0107 | -- | 24.48 | 39 | -- | -- |
| 331.39 | 0.85 | 7.73 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 18 | 89.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 25 | 89.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 41 | 90.81 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 79 | 92.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 80 | 92.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 210 | 94.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 234 | 94.63 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 324 | 95.16 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 409 | 95.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 411 | 95.55 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 417 | 95.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 428 | 95.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 486 | 95.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 20 |
| 494 | 95.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 637 | 96.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 867 | 96.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 910 | 97.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 930 | 97.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |