Os06g0353700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0353700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 369.25 | 0.903 | 4.3 | -0.387 | 2.43 | 1.42 | 2.91 | -4.7 | -0.0486 | 8.51 | 26.6 | 1416 | -- | -- |
| 376.5 | 0.904 | 4.17 | 0.869 | 2.47 | 1.01 | 3.1 | -- | 0.223 | 8.42 | 26.94 | 1401 | -- | -- |
| 396.48 | 0.927 | 4.29 | -0.295 | 2.42 | 1.42 | -- | -4.68 | -0.0416 | 8.54 | 26.6 | 1415 | -- | -- |
| 402.31 | 0.934 | 4.15 | 0.924 | 2.42 | 0.933 | -- | -- | 0.186 | 8.58 | 26.27 | 1384 | -- | -- |
| 726.59 | 1.26 | 4.36 | -0.29 | -- | 1.36 | -- | -4.68 | -0.0405 | -- | 26.5 | 1432 | -- | -- |
| 415.04 | 0.955 | 4.14 | 1.15 | 2.41 | -- | 2.97 | -- | 0.231 | 8.38 | -- | -- | -- | -- |
| 442.78 | 0.985 | 4.14 | 1.25 | 2.41 | -- | -- | -- | 0.23 | 8.41 | -- | -- | -- | -- |
| 729.33 | 1.26 | 4.22 | 0.952 | -- | 0.865 | -- | -- | 0.21 | -- | 26.3 | 1426 | -- | -- |
| 422.58 | 0.957 | 4.19 | -- | 2.43 | 1.16 | -- | -- | 0.0088 | 8.57 | 25.11 | 1424 | -- | -- |
| 765.27 | 1.29 | 4.21 | 1.26 | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
| 483.73 | 1.03 | 4.17 | -- | 2.41 | -- | -- | -- | 0.0916 | 8.37 | -- | -- | -- | -- |
| 748.94 | 1.27 | 4.27 | -- | -- | 1.16 | -- | -- | -0.0455 | -- | 23.9 | 1433 | -- | -- |
| 807.11 | 1.33 | 4.24 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 363.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 363.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 363.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 20 | 366.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 33 | 366.43 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 86 | 367.66 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 109 | 368.27 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 111 | 368.29 | temperature | 10 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 123 | 368.68 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 125 | 368.71 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 127 | 368.72 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 155 | 369.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 204 | 370.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 238 | 371.15 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 239 | 371.15 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 247 | 371.18 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 262 | 371.32 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 10 |
| 273 | 371.39 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 278 | 371.40 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 280 | 371.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 285 | 371.42 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 302 | 371.43 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 335 | 371.49 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 451 | 372.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 485 | 372.36 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 536 | 372.54 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 587 | 372.89 | humidity | 50 | 1440 | > th | dose independent | sin | 11 | NA |
| 616 | 373.16 | humidity | 50 | 1440 | < th | dose independent | sin | 11 | NA |
| 635 | 373.42 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 659 | 373.49 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 707 | 373.80 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 766 | 374.30 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 787 | 374.44 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 812 | 374.58 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 828 | 374.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 835 | 375.00 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 845 | 375.11 | wind | 1 | 90 | > th | dose independent | rect. | 22 | 18 |
| 856 | 375.30 | wind | 7 | 90 | < th | dose independent | rect. | 3 | 19 |
| 857 | 375.33 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 860 | 375.42 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 15 |
| 874 | 375.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 918 | 375.98 | radiation | 1 | 30 | > th | dose independent | rect. | 17 | 14 |
| 920 | 375.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 982 | 376.15 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 17 |
| 998 | 376.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 14 |