Os06g0346300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acyl-CoA dehydrogenase family protein.
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Os06g0346300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acyl-CoA dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346.81 | 0.875 | 3.32 | 1.14 | 0.292 | 12 | 0.208 | 59.6 | -0.262 | 0.122 | 4.653 | 532 | 1.13 | 4.41 |
| 385.99 | 0.922 | 3.22 | 0.699 | 0.126 | 0.0525 | 1.27 | -- | -0.256 | 5.31 | 4.653 | 532 | 1.13 | 4.41 |
| 346.98 | 0.868 | 3.32 | 1.13 | 0.296 | 12 | -- | 59.5 | -0.262 | 23.9 | 4.637 | 531 | 1.13 | 4.38 |
| 373.24 | 0.906 | 3.22 | 0.683 | 0.25 | 3.81 | -- | -- | -0.254 | 1.14 | 9.299 | 2 | 4.07 | 7.31 |
| 351.85 | 0.874 | 3.32 | 1.15 | -- | 12.1 | -- | 60.1 | -0.261 | -- | 4.655 | 531 | 1.12 | 4.28 |
| 386 | 0.921 | 3.22 | 0.699 | 0.127 | -- | 1.27 | -- | -0.256 | 5.3 | -- | -- | -- | -- |
| 387.69 | 0.922 | 3.22 | 0.696 | 0.232 | -- | -- | -- | -0.264 | 1.53 | -- | -- | -- | -- |
| 377.09 | 0.908 | 3.22 | 0.693 | -- | 3.73 | -- | -- | -0.249 | -- | 9.299 | 2 | 4.07 | 7.31 |
| 385.53 | 0.919 | 3.24 | -- | 0.261 | 3.87 | -- | -- | -0.33 | 1.24 | 9.299 | 2 | 4.07 | 7.31 |
| 390.97 | 0.924 | 3.22 | 0.705 | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
| 400.44 | 0.936 | 3.24 | -- | 0.244 | -- | -- | -- | -0.341 | 1.63 | -- | -- | -- | -- |
| 389.75 | 0.922 | 3.24 | -- | -- | 3.79 | -- | -- | -0.326 | -- | 9.299 | 2 | 4.07 | 7.31 |
| 404.08 | 0.938 | 3.24 | -- | -- | -- | -- | -- | -0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.35 | wind | 5.0 | 720 | > th | dose independent | rect. | 1 | 5 |
| 2 | 354.45 | wind | 5.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 5 | 355.55 | wind | 5.0 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 9 | 357.55 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 13 | 357.68 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 19 | 358.15 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 21 | 358.20 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 30 | 358.90 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 31 | 358.90 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 40 | 359.34 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 42 | 359.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 8 |
| 45 | 359.37 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 6 |
| 53 | 359.46 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 80 | 360.06 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 90 | 360.34 | wind | 5.0 | 720 | < th | dose independent | rect. | 24 | 9 |
| 98 | 360.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 99 | 360.58 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 101 | 360.60 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 106 | 360.61 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 140 | 361.03 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 141 | 361.03 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 12 | 6 |
| 157 | 361.15 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 184 | 361.51 | humidity | 60.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 199 | 361.53 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 8 |
| 201 | 361.53 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 217 | 361.59 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 288 | 361.81 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 295 | 361.89 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 297 | 361.89 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 301 | 361.90 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 323 | 362.03 | radiation | 10.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 329 | 362.09 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 331 | 362.13 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 334 | 362.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 336 | 362.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 348 | 362.24 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 12 |
| 446 | 362.79 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 8 |
| 462 | 362.88 | precipitation | 0.1 | 720 | < th | dose independent | sin | 15 | NA |
| 466 | 362.88 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 15 | NA |
| 508 | 363.08 | radiation | 10.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 511 | 363.10 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 513 | 363.14 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 533 | 363.21 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 651 | 363.62 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 20 | 15 |
| 658 | 363.64 | wind | 5.0 | 720 | < th | dose independent | sin | 8 | NA |
| 662 | 363.65 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 664 | 363.67 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 10 |
| 695 | 363.75 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 704 | 363.82 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 734 | 363.85 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 750 | 363.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 765 | 363.96 | precipitation | 0.1 | 720 | > th | dose independent | sin | 15 | NA |
| 823 | 364.10 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 16 |
| 828 | 364.10 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 863 | 364.27 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 6 |
| 880 | 364.41 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 882 | 364.42 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 908 | 364.49 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 17 |
| 909 | 364.49 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 936 | 364.55 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 23 |
| 938 | 364.55 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 956 | 364.60 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 961 | 364.62 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 987 | 364.71 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 6 | 2 |