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Os06g0320100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF773 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0135) R2 : 6.79e-06
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00158 (0.0284) R2dN8 : 8.77e-06 R2N8 : 6.79e-06
σ : 0.254
deviance : 29.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.63 0.186 10.4 -0.211 0.384 -0.129 -0.0126 0.854 0.0156 1.37 31.91 1510 -- --
16.57 0.19 10.4 -0.336 0.376 -0.143 0.0907 -- -0.0371 1.21 57.78 1456 -- --
15.63 0.184 10.4 -0.208 0.384 -0.128 -- 0.854 0.0179 1.37 31.22 1509 -- --
15.97 0.186 10.4 -0.406 0.413 -0.319 -- -- -0.0791 1.14 58.83 1462 -- --
18.13 0.199 10.4 -0.326 -- -0.516 -- 0.36 -0.0406 -- -1.581e-05 1725 -- --
17.52 0.196 10.4 -0.329 0.393 -- -0.0439 -- -0.0416 1.37 -- -- -- --
17.53 0.196 10.4 -0.328 0.393 -- -- -- -0.0413 1.37 -- -- -- --
18.43 0.201 10.4 -0.314 -- -0.518 -- -- -0.0391 -- -1.581e-05 1725 -- --
19.94 0.208 10.4 -- 0.404 -0.184 -- -- -0.00497 1.15 56.04 1455 -- --
27.04 0.243 10.4 -0.312 -- -- -- -- -0.0331 -- -- -- -- --
20.36 0.211 10.4 -- 0.387 -- -- -- -0.00483 1.34 -- -- -- --
21.03 0.214 10.4 -- -- -0.517 -- -- -0.0043 -- -1.581e-05 1725 -- --
29.61 0.254 10.4 -- -- -- -- -- 0.00158 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.65 radiation 40.0 10 < th dose dependent rect. 3 19
4 14.79 radiation 20.0 10 < th dose independent rect. 3 19
6 14.82 radiation 40.0 90 < th dose independent rect. 3 19
7 14.83 radiation 40.0 10 < th dose independent rect. 3 19
17 14.89 radiation 40.0 10 < th dose dependent rect. 1 21
21 14.93 atmosphere 1015.0 90 < th dose dependent rect. 13 20
22 14.94 radiation 20.0 10 < th dose independent rect. 1 21
24 14.96 atmosphere 1005.0 90 > th dose independent rect. 21 6
26 14.97 atmosphere 1005.0 270 > th dose independent rect. 21 3
27 14.97 radiation 20.0 90 < th dose independent rect. 1 21
30 14.98 radiation 40.0 90 < th dose independent rect. 1 21
38 15.03 atmosphere 1015.0 30 < th dose dependent rect. 3 19
48 15.06 atmosphere 995.0 30 > th dose dependent rect. 22 15
49 15.06 humidity 50.0 10 > th dose dependent rect. 3 19
52 15.07 atmosphere 995.0 90 > th dose dependent rect. 21 6
66 15.11 radiation 20.0 1440 < th dose independent rect. 11 1
68 15.11 radiation 30.0 1440 < th dose dependent rect. 11 1
70 15.11 atmosphere 1015.0 30 < th dose dependent rect. 1 21
87 15.14 wind 1.0 90 > th dose independent rect. 21 6
88 15.14 temperature 20.0 10 > th dose independent rect. 13 20
106 15.16 atmosphere 1005.0 10 > th dose independent rect. 22 5
108 15.16 humidity 90.0 90 < th dose independent rect. 21 16
110 15.16 atmosphere 1015.0 90 < th dose dependent rect. 15 18
117 15.17 wind 9.0 1440 < th dose independent rect. 23 5
127 15.19 radiation 40.0 10 < th dose independent rect. 12 10
129 15.19 radiation 10.0 1440 > th dose dependent rect. 11 1
140 15.20 atmosphere 995.0 10 > th dose dependent rect. 22 5
161 15.22 humidity 50.0 10 > th dose dependent rect. 1 21
168 15.23 atmosphere 995.0 90 > th dose dependent rect. 9 18
197 15.26 atmosphere 995.0 10 > th dose dependent rect. 22 17
205 15.27 temperature 10.0 30 > th dose dependent rect. 13 9
209 15.28 radiation 1.0 1440 > th dose independent rect. 10 3
225 15.29 radiation 30.0 90 < th dose dependent rect. 3 14
226 15.29 atmosphere 1015.0 10 < th dose dependent rect. 15 18
230 15.30 wind 1.0 270 > th dose independent rect. 21 3
231 15.30 wind 5.0 270 < th dose independent rect. 21 3
233 15.30 atmosphere 1005.0 10 > th dose independent rect. 22 15
271 15.32 wind 1.0 10 > th dose independent rect. 13 9
283 15.33 wind 7.0 90 < th dose independent rect. 21 6
288 15.33 radiation 30.0 90 < th dose dependent rect. 3 12
298 15.34 radiation 20.0 1440 > th dose independent rect. 11 1
299 15.34 temperature 10.0 1440 > th dose independent rect. 23 5
302 15.34 temperature 30.0 1440 < th dose independent rect. 23 5
306 15.34 humidity 50.0 1440 > th dose independent rect. 23 5
315 15.34 atmosphere 995.0 1440 > th dose independent rect. 23 5
316 15.34 radiation 1.0 1440 < th dose independent rect. 23 5
339 15.34 temperature 10.0 1440 > th dose independent rect. 4 19
343 15.34 radiation 1.0 1440 < th dose dependent rect. 23 5
348 15.34 radiation 1.0 14400 < th dose dependent rect. 23 5
352 15.34 atmosphere 1005.0 90 > th dose dependent rect. 9 18
362 15.35 wind 5.0 10 < th dose independent rect. 22 5
364 15.35 atmosphere 1005.0 270 > th dose independent rect. 19 17
369 15.35 atmosphere 1015.0 90 < th dose dependent rect. 1 8
370 15.35 atmosphere 1015.0 10 < th dose dependent rect. 13 9
391 15.36 wind 9.0 10 < th dose independent rect. 22 15
394 15.36 humidity 50.0 10 > th dose independent rect. 3 19
408 15.37 radiation 1.0 1440 < th dose independent rect. 11 2
412 15.37 wind 9.0 10 < th dose independent rect. 13 9
414 15.37 precipitation 0.1 10 < th dose independent rect. 22 15
423 15.37 radiation 1.0 1440 < th dose dependent rect. 11 2
427 15.37 precipitation 0.1 10 < th dose dependent rect. 22 15
444 15.38 temperature 10.0 10 > th dose independent rect. 13 9
446 15.38 atmosphere 1010.0 10 < th dose independent rect. 13 9
449 15.38 temperature 10.0 10 > th dose independent rect. 22 15
450 15.38 atmosphere 995.0 10 > th dose independent rect. 22 15
455 15.38 atmosphere 995.0 270 > th dose dependent rect. 21 3
474 15.39 temperature 10.0 90 > th dose independent rect. 21 6
475 15.39 temperature 30.0 90 < th dose independent rect. 21 6
476 15.39 humidity 50.0 90 > th dose independent rect. 21 6
479 15.39 atmosphere 995.0 90 > th dose independent rect. 21 6
480 15.39 radiation 1.0 90 < th dose independent rect. 21 6
485 15.39 precipitation 0.1 90 < th dose independent rect. 21 6
486 15.39 precipitation 0.1 10 < th dose independent rect. 13 9
487 15.39 radiation 20.0 90 < th dose independent rect. 3 14
490 15.39 temperature 10.0 90 > th dose independent rect. 3 18
492 15.39 atmosphere 1015.0 90 < th dose independent rect. 3 18
495 15.39 radiation 1.0 90 < th dose dependent rect. 21 6
500 15.39 precipitation 0.1 90 < th dose dependent rect. 21 6
501 15.39 precipitation 0.1 10 < th dose dependent rect. 13 9
522 15.40 precipitation 0.1 90 < th dose independent rect. 3 18
527 15.40 atmosphere 1015.0 90 < th dose dependent rect. 3 6
532 15.40 precipitation 0.1 90 < th dose dependent rect. 3 18
540 15.41 temperature 10.0 1440 > th dose independent rect. 14 9
544 15.41 temperature 10.0 1440 > th dose independent rect. 23 15
547 15.41 atmosphere 995.0 1440 > th dose independent rect. 23 15
565 15.42 temperature 10.0 10 > th dose independent rect. 22 5
566 15.42 temperature 30.0 10 < th dose independent rect. 22 5
567 15.42 humidity 50.0 10 > th dose independent rect. 22 5
570 15.42 atmosphere 995.0 10 > th dose independent rect. 22 5
571 15.42 radiation 1.0 10 < th dose independent rect. 22 5
576 15.42 precipitation 0.1 10 < th dose independent rect. 22 5
588 15.42 temperature 10.0 10 > th dose independent rect. 3 19
590 15.42 atmosphere 1015.0 10 < th dose independent rect. 3 19
594 15.42 radiation 1.0 10 < th dose dependent rect. 22 5
600 15.42 precipitation 0.1 10 < th dose dependent rect. 22 5
611 15.43 radiation 1.0 1440 > th dose independent rect. 13 1
628 15.43 radiation 20.0 90 < th dose independent rect. 3 12
664 15.44 temperature 10.0 270 > th dose independent rect. 21 3
665 15.44 temperature 30.0 270 < th dose independent rect. 21 3
666 15.44 humidity 50.0 270 > th dose independent rect. 21 3
669 15.44 atmosphere 995.0 270 > th dose independent rect. 21 3
670 15.44 radiation 1.0 270 < th dose independent rect. 21 3
684 15.44 radiation 40.0 1440 < th dose independent rect. 15 17
688 15.44 temperature 10.0 270 > th dose independent rect. 24 21
692 15.44 radiation 1.0 270 < th dose dependent rect. 21 3
722 15.45 precipitation 0.1 270 < th dose independent rect. 21 3
733 15.45 radiation 1.0 90 < th dose independent rect. 3 18
739 15.45 precipitation 0.1 270 < th dose dependent rect. 21 3
752 15.45 atmosphere 995.0 90 > th dose dependent rect. 5 22
795 15.47 atmosphere 995.0 90 > th dose independent rect. 3 18
818 15.47 atmosphere 1005.0 90 > th dose dependent rect. 5 22
846 15.48 atmosphere 1005.0 30 > th dose independent rect. 5 23
866 15.49 humidity 90.0 270 < th dose independent rect. 20 4
871 15.49 radiation 40.0 1440 < th dose independent rect. 15 8
876 15.49 wind 9.0 90 < th dose independent rect. 3 18
877 15.49 atmosphere 1005.0 30 > th dose independent rect. 9 18
879 15.49 atmosphere 995.0 10 > th dose independent rect. 3 19
883 15.49 atmosphere 1015.0 270 < th dose independent rect. 24 21
885 15.49 precipitation 0.1 270 < th dose independent rect. 24 21
897 15.49 precipitation 0.1 270 < th dose dependent rect. 24 21
917 15.50 temperature 10.0 90 > th dose dependent rect. 13 20
925 15.51 temperature 20.0 1440 > th dose independent rect. 5 2
932 15.51 wind 1.0 10 > th dose independent rect. 4 18
957 15.52 humidity 70.0 1440 > th dose independent rect. 10 3
963 15.52 humidity 50.0 30 > th dose independent rect. 22 15
975 15.52 wind 9.0 270 < th dose dependent rect. 21 3