Os06g0304600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0304600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase A1, pepsin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 576.03 | 1.13 | 8.88 | -8.14 | 2.22 | 3.74 | 1.17 | -9.12 | -1.06 | 8.45 | 25.44 | 1194 | 11.1 | -- |
| 603.78 | 1.14 | 8.67 | -5.99 | 2.27 | 3.27 | 1.38 | -- | -0.84 | 9.03 | 23.05 | 1101 | 11.1 | -- |
| 580.22 | 1.12 | 8.88 | -8.21 | 2.21 | 3.8 | -- | -9.71 | -1.03 | 8.47 | 25.59 | 1194 | 10.8 | -- |
| 608.85 | 1.15 | 8.67 | -5.96 | 2.24 | 3.12 | -- | -- | -0.825 | 8.87 | 23.2 | 1117 | 11.2 | -- |
| 756.94 | 1.28 | 8.95 | -6.77 | -- | 4.71 | -- | -2.89 | -1.72 | -- | 19.67 | 694 | 4.38 | -- |
| 895.15 | 1.4 | 8.57 | -5.13 | 2.3 | -- | 1.79 | -- | -0.357 | 7.26 | -- | -- | -- | -- |
| 903.69 | 1.41 | 8.57 | -5.09 | 2.3 | -- | -- | -- | -0.36 | 7.3 | -- | -- | -- | -- |
| 699.72 | 1.23 | 8.73 | -5.97 | -- | 4.32 | -- | -- | -0.941 | -- | 12.21 | 892 | 5.38 | -- |
| 1465.89 | 1.78 | 8.34 | -- | 2.38 | 1.68 | -- | -- | 0.51 | 7.97 | 28.5 | 1142 | 11.2 | -- |
| 1184.45 | 1.61 | 8.62 | -5.05 | -- | -- | -- | -- | -0.322 | -- | -- | -- | -- | -- |
| 1587.59 | 1.86 | 8.44 | -- | 2.25 | -- | -- | -- | 0.207 | 7.45 | -- | -- | -- | -- |
| 1558.05 | 1.84 | 8.55 | -- | -- | 2.96 | -- | -- | -0.0213 | -- | -4.41 | 890 | 5.71 | -- |
| 1858.33 | 2.01 | 8.5 | -- | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 567.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 12 | 572.44 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 14 | 572.70 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 27 | 574.35 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 20 |
| 38 | 575.51 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 44 | 575.71 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 53 | 576.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 133 | 579.83 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 142 | 580.08 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 143 | 580.14 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 170 | 580.83 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 294 | 583.38 | wind | 5 | 43200 | > th | dose independent | sin | 15 | NA |
| 318 | 583.93 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 358 | 584.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 408 | 585.63 | wind | 5 | 43200 | > th | dose independent | sin | 22 | NA |
| 429 | 585.86 | wind | 5 | 43200 | < th | dose independent | sin | 15 | NA |
| 493 | 586.65 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 22 |
| 509 | 586.83 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 519 | 586.89 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 535 | 587.02 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 547 | 587.09 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 555 | 587.18 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 21 |
| 595 | 587.48 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 599 | 587.50 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 601 | 587.52 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 614 | 587.64 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 628 | 587.78 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 652 | 588.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 666 | 588.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 671 | 588.15 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 850 | 590.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 873 | 590.42 | wind | 9 | 43200 | > th | dose dependent | sin | 15 | NA |
| 911 | 590.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 966 | 591.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |