Os06g0304500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CRS1/YhbY domain containing protein.
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Os06g0304500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CRS1/YhbY domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.49 | 0.414 | 7.8 | 0.0287 | 0.895 | -2.46 | 0.45 | -1.17 | 0.334 | 0.455 | 29.27 | 221 | -- | -- |
| 78.73 | 0.413 | 7.82 | -0.166 | 0.909 | -2.48 | 0.35 | -- | 0.319 | 0.45 | 30.57 | 211 | -- | -- |
| 78.25 | 0.412 | 7.81 | -0.0282 | 0.883 | -2.45 | -- | -0.901 | 0.324 | 0.458 | 29.32 | 225 | -- | -- |
| 78.97 | 0.414 | 7.82 | -0.188 | 0.907 | -2.49 | -- | -- | 0.309 | 0.521 | 30.37 | 211 | -- | -- |
| 86.2 | 0.432 | 7.8 | -0.0907 | -- | -2.51 | -- | -0.814 | 0.323 | -- | 29.65 | 697 | -- | -- |
| 158.42 | 0.59 | 7.72 | 0.446 | 0.755 | -- | 0.506 | -- | 0.784 | 20.8 | -- | -- | -- | -- |
| 159.28 | 0.591 | 7.72 | 0.429 | 0.753 | -- | -- | -- | 0.784 | 20.8 | -- | -- | -- | -- |
| 86.8 | 0.434 | 7.81 | -0.235 | -- | -2.51 | -- | -- | 0.303 | -- | 30.18 | 704 | -- | -- |
| 79.79 | 0.416 | 7.81 | -- | 0.889 | -2.42 | -- | -- | 0.346 | 0.441 | 30.53 | 211 | -- | -- |
| 191.52 | 0.647 | 7.7 | 0.429 | -- | -- | -- | -- | 0.778 | -- | -- | -- | -- | -- |
| 164.13 | 0.599 | 7.73 | -- | 0.752 | -- | -- | -- | 0.736 | 20.9 | -- | -- | -- | -- |
| 88.21 | 0.437 | 7.8 | -- | -- | -2.43 | -- | -- | 0.344 | -- | 30.26 | 691 | -- | -- |
| 196.37 | 0.654 | 7.71 | -- | -- | -- | -- | -- | 0.731 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 2 | 77.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 5 | 77.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 6 | 77.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 7 | 77.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 12 | 77.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 15 | 77.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 21 | 78.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 24 | 78.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 29 | 78.12 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 43 | 78.20 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 135 | 79.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 149 | 79.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 152 | 79.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 158 | 79.44 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 167 | 79.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 183 | 79.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 210 | 79.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 15 |
| 216 | 79.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 247 | 79.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 256 | 79.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 268 | 79.92 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 309 | 80.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 319 | 80.04 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 391 | 80.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 8 |
| 411 | 80.39 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 775 | 81.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 830 | 81.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 994 | 82.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |