Os06g0295500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0295500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.89 | 0.393 | 5.88 | 0.525 | 0.356 | -1.96 | 0.16 | -1.62 | 0.176 | 2.45 | 25.78 | 252 | -- | -- |
| 72.72 | 0.397 | 5.92 | 0.237 | 0.43 | -1.82 | -0.187 | -- | 0.118 | 2.69 | 27.05 | 229 | -- | -- |
| 69.95 | 0.39 | 5.89 | 0.5 | 0.359 | -1.95 | -- | -1.51 | 0.171 | 2.52 | 25.88 | 256 | -- | -- |
| 72.74 | 0.397 | 5.91 | 0.243 | 0.452 | -1.87 | -- | -- | 0.106 | 2.84 | 27.13 | 238 | -- | -- |
| 73.49 | 0.399 | 5.87 | 0.552 | -- | -1.94 | -- | -1.7 | 0.227 | -- | 24.75 | 375 | -- | -- |
| 123.04 | 0.52 | 5.83 | 0.726 | 0.152 | -- | -0.107 | -- | 0.517 | 21.3 | -- | -- | -- | -- |
| 123.08 | 0.52 | 5.83 | 0.73 | 0.154 | -- | -- | -- | 0.517 | 21 | -- | -- | -- | -- |
| 76.96 | 0.409 | 5.9 | 0.298 | -- | -1.73 | -- | -- | 0.157 | -- | 25.47 | 388 | -- | -- |
| 74.09 | 0.401 | 5.92 | -- | 0.489 | -1.98 | -- | -- | 0.0571 | 2.92 | 27.2 | 236 | -- | -- |
| 124.43 | 0.521 | 5.82 | 0.73 | -- | -- | -- | -- | 0.516 | -- | -- | -- | -- | -- |
| 137.13 | 0.548 | 5.84 | -- | 0.153 | -- | -- | -- | 0.436 | 21.4 | -- | -- | -- | -- |
| 78.94 | 0.414 | 5.91 | -- | -- | -1.85 | -- | -- | 0.105 | -- | 25.36 | 394 | -- | -- |
| 138.51 | 0.549 | 5.84 | -- | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 2 | 70.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 4 | 70.42 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 5 | 70.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 10 | 70.53 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 12 | 70.68 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 71.78 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 54 | 72.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 77 | 73.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 93 | 73.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 127 | 74.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 139 | 74.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 154 | 74.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 243 | 76.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 278 | 76.97 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 283 | 77.00 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 303 | 77.24 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 311 | 77.32 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 357 | 77.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 359 | 77.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 366 | 77.93 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 381 | 78.05 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 401 | 78.23 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 430 | 78.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 432 | 78.42 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 471 | 78.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 481 | 78.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 504 | 78.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 604 | 79.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 637 | 79.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 698 | 79.54 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 971 | 80.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 4 |