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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0295000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.07 (0.0253) R2 : 0.000693
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.03 (0.0534) R2dN8 : 0.000895 R2N8 : 0.000693
σ : 0.477
deviance : 104.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.98 0.463 3.04 -0.0181 0.198 0.174 -0.683 -1.49 -0.0732 7.64 8.8 4908 -- --
98.2 0.462 3.09 0.0925 0.205 0.376 -0.634 -- -0.127 7.86 8.898 4929 -- --
98.16 0.461 3.05 -0.0313 0.192 0.176 -- -1.4 -0.0726 8.17 8.927 4884 -- --
99.3 0.464 3.09 0.0852 0.204 0.365 -- -- -0.122 7.85 8.971 4907 -- --
98.41 0.462 3.06 -0.124 -- 0.147 -- -1.93 -0.0883 -- 10.25 4334 -- --
101.88 0.473 3.07 -0.0144 0.179 -- -0.536 -- -0.0355 8.26 -- -- -- --
102.7 0.475 3.07 -0.0289 0.18 -- -- -- -0.0344 8.94 -- -- -- --
99.97 0.466 3.08 0.0742 -- 0.392 -- -- -0.0582 -- 9.44 4376 -- --
99.45 0.464 3.09 -- 0.203 0.351 -- -- -0.123 8.02 8.9 4907 -- --
104.55 0.478 3.07 -0.029 -- -- -- -- -0.0332 -- -- -- -- --
102.73 0.474 3.07 -- 0.18 -- -- -- -0.0312 8.95 -- -- -- --
100.1 0.466 3.08 -- -- 0.376 -- -- -0.0593 -- 9.445 4365 -- --
104.57 0.477 3.07 -- -- -- -- -- -0.03 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.36 temperature 25.0 10 > th dose independent rect. 7 1
3 86.28 radiation 10.0 30 > th dose independent rect. 6 2
21 90.39 temperature 25.0 10 > th dose dependent rect. 7 1
23 90.86 wind 3.0 10 < th dose dependent rect. 6 2
24 90.89 humidity 80.0 10 < th dose independent rect. 7 1
54 91.03 radiation 10.0 10 > th dose dependent rect. 6 1
131 93.71 radiation 10.0 30 > th dose independent sin 10 NA
133 93.76 temperature 25.0 90 < th dose independent rect. 6 1
143 94.25 wind 9.0 4320 > th dose dependent rect. 12 3
146 94.33 temperature 25.0 30 > th dose independent rect. 22 10
168 94.55 temperature 25.0 30 > th dose independent rect. 20 12
184 94.89 wind 9.0 4320 > th dose independent rect. 13 2
186 94.91 wind 3.0 30 < th dose independent rect. 6 2
187 94.91 atmosphere 1005.0 30 > th dose dependent rect. 6 1
191 95.01 atmosphere 1005.0 30 > th dose independent rect. 6 2
204 95.22 wind 9.0 4320 < th dose independent rect. 13 3
214 95.39 radiation 20.0 10 < th dose independent rect. 6 2
224 95.53 wind 9.0 1440 > th dose independent rect. 9 1
242 95.73 humidity 80.0 30 > th dose dependent rect. 6 1
252 95.83 wind 7.0 4320 > th dose independent rect. 1 1
259 95.83 wind 7.0 4320 > th dose dependent rect. 1 1
271 95.93 wind 1.0 720 < th dose independent rect. 21 2
277 96.01 humidity 50.0 10 > th dose independent rect. 8 22
287 96.15 wind 9.0 1440 < th dose independent rect. 9 1
289 96.16 humidity 80.0 4320 < th dose dependent rect. 20 5
293 96.21 humidity 80.0 4320 < th dose dependent rect. 21 3
296 96.23 wind 1.0 90 > th dose independent rect. 6 1
299 96.23 atmosphere 1010.0 10 < th dose independent rect. 8 23
303 96.24 wind 1.0 720 < th dose dependent rect. 21 2
304 96.25 temperature 30.0 30 < th dose dependent rect. 6 1
315 96.32 humidity 80.0 4320 < th dose dependent rect. 20 10
327 96.35 wind 9.0 4320 > th dose independent rect. 22 18
346 96.42 wind 9.0 4320 > th dose independent rect. 1 15
349 96.43 wind 9.0 4320 < th dose independent rect. 6 10
352 96.43 wind 9.0 4320 > th dose dependent rect. 21 19
361 96.46 wind 9.0 4320 < th dose independent rect. 22 18
367 96.48 wind 9.0 4320 > th dose dependent rect. 1 15
374 96.50 wind 9.0 4320 < th dose independent rect. 1 15
404 96.57 wind 1.0 720 < th dose dependent rect. 3 1
433 96.67 humidity 80.0 4320 < th dose independent rect. 21 11
461 96.73 humidity 80.0 4320 < th dose independent rect. 21 9
466 96.74 wind 9.0 4320 > th dose independent rect. 19 1
471 96.74 wind 9.0 4320 > th dose dependent rect. 19 1
485 96.77 humidity 70.0 4320 > th dose independent rect. 22 8
497 96.79 humidity 70.0 30 > th dose independent rect. 6 2
529 96.87 humidity 80.0 4320 < th dose independent rect. 21 5
548 96.92 wind 7.0 1440 > th dose dependent rect. 9 1
557 96.94 atmosphere 1000.0 30 > th dose independent rect. 8 22
559 96.95 wind 9.0 270 > th dose independent rect. 9 1
560 96.95 humidity 50.0 4320 > th dose independent rect. 16 1
601 97.04 wind 9.0 4320 > th dose dependent rect. 13 21
608 97.07 humidity 80.0 4320 > th dose independent rect. 21 11
613 97.07 wind 9.0 4320 > th dose dependent rect. 13 11
621 97.09 wind 9.0 4320 > th dose independent sin 0 NA
637 97.13 humidity 70.0 4320 > th dose independent rect. 20 2
679 97.19 wind 9.0 4320 > th dose dependent sin 23 NA
685 97.20 wind 9.0 4320 < th dose independent sin 0 NA
688 97.20 temperature 10.0 90 > th dose independent rect. 6 1
691 97.20 humidity 50.0 90 > th dose independent rect. 6 1
694 97.20 atmosphere 1015.0 90 < th dose independent rect. 6 1
697 97.20 precipitation 0.1 90 < th dose independent rect. 6 1
698 97.20 wind 9.0 1440 < th dose independent rect. 7 2
699 97.20 temperature 10.0 1440 > th dose independent rect. 7 2
703 97.20 humidity 50.0 1440 > th dose independent rect. 7 2
705 97.20 atmosphere 995.0 1440 > th dose independent rect. 7 2
706 97.20 atmosphere 1015.0 1440 < th dose independent rect. 7 2
708 97.20 temperature 10.0 1440 > th dose independent rect. 9 22
711 97.20 temperature 10.0 90 > th dose independent rect. 7 23
714 97.20 precipitation 0.1 90 < th dose dependent rect. 6 1
754 97.25 precipitation 0.1 30 < th dose independent rect. 8 22
757 97.25 precipitation 0.1 30 < th dose dependent rect. 8 22
763 97.26 temperature 30.0 1440 < th dose independent rect. 7 1
811 97.30 wind 9.0 4320 > th dose independent rect. 12 22
816 97.30 radiation 40.0 10 < th dose dependent rect. 6 2
823 97.31 wind 9.0 4320 > th dose independent rect. 12 12
863 97.36 humidity 70.0 4320 > th dose independent rect. 20 4
870 97.36 wind 9.0 4320 < th dose independent rect. 13 22
889 97.37 wind 9.0 4320 < th dose independent rect. 1 6
895 97.37 wind 9.0 4320 < th dose independent rect. 12 15
907 97.38 temperature 20.0 270 > th dose independent rect. 4 1
912 97.38 wind 9.0 4320 < th dose independent rect. 12 11
937 97.39 radiation 40.0 90 < th dose dependent rect. 6 1